RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 IKBKBO14920 756 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 LATS1O95835 1130 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 ZBED1O96006 694 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 NR3C1P04150 777 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SLC6A4P31645 630 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SLC8A1P32418 973 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 CSKP41240 450 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 UCNP55089 124 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 GABREP78334 506 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 KCNC4Q03721 635 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 C9orf64Q5T6V5 341 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 PM20D1Q6GTS8 502 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 MFN1Q8IWA4 741 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 TAS1R2Q8TE23 839 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 RNF139Q8WU17 664 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 KCNE4Q8WWG9 221 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 MRGPRX3Q96LB0 322 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 ZNF578Q96N58 590 aaPredicted RBP12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 STIM2Q9P246 746 aa12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 INTS6Q9UL03 887 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-205ENST00000525916 SPTA1P02549 2419 aa12.96□□□□□ -0.34
CCDC90B-205ENST00000525916 TTC34A8MYJ7 566 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 TRIM38O00635 465 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 KLK10O43240 276 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 SLC28A2O43868 658 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 TRIM49P0CI25 452 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 TRIM49CP0CI26 452 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 CTSOP43234 321 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 GCLMP48507 274 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 VAMP7P51809 220 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 DAB2P98082 770 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 E2F1Q01094 437 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 ADIGQ0VDE8 80 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 STK4Q13043 487 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 NAPEPLDQ6IQ20 393 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 SLC4A11Q8NBS3 891 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 TTC17Q96AE7 1141 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 PRICKLE1Q96MT3 831 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 UBXN6Q9BZV1 441 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 MMRN2Q9H8L6 949 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 COL12A1Q99715 3063 aa12.95□□□□□ -0.34
CCDC90B-205ENST00000525916 PIEZO2Q9H5I5 2752 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 PTPN13Q12923 2485 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 DOPEY2Q9Y3R5 2298 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 LATO43561 262 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 RHOBTB3O94955 611 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 WISP1O95388 367 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 ASLP04424 464 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 GOT1P17174 413 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 RAD23BP54727 409 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 PPP3CAQ08209 521 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 PNOCQ13519 176 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 KMT5BQ4FZB7 885 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 FAM133BQ5BKY9 247 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 MPP7Q5T2T1 576 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 BSPRYQ5W0U4 402 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 ARHGAP17Q68EM7 881 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 STK40Q8N2I9 435 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TATDN2Q93075 761 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 FAM129BQ96TA1 746 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 FRMD4BQ9Y2L6 1034 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 TRPM6Q9BX84 2022 aa12.94□□□□□ -0.34
CCDC90B-205ENST00000525916 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 YJEFN3A6XGL0 299 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 E7ENQ6 273 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 XPO1O14980 1071 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 USP12O75317 370 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 IGLV3-27P01718 113 aa12.93□□□□□ -0.34
CCDC90B-205ENST00000525916 C5AR1P21730 350 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms