RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 INAVAQ3KP66 663 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 SYPL2Q5VXT5 272 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.947e-7■□□□□ 8.6
CTNNA1-240ENST00000523912 ADAT2Q7Z6V5 191 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 DSG4Q86SJ6 1040 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 CFAP52Q8N1V2 620 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 C1orf131Q8NDD1 294 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 OR2I1PQ8NGU4 316 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 WFDC5Q8TCV5 224 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 SLC2A13Q96QE2 648 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 OMDQ99983 421 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 OSGEPQ9NPF4 335 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 RRN3Q9NYV6 651 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 COX16Q9P0S2 106 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 EIF2B4Q9UI10 523 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 CYTH4Q9UIA0 394 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 STAP1Q9ULZ2 295 aa9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-240ENST00000523912 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 BECN2A8MW95 431 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 SIN3BO75182 1162 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 RNASEH2AO75792 299 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 IGLV3-25P01717 112 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CAPNS1P04632 268 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 C7P10643 843 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CD59P13987 128 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 SPINK2P20155 84 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CD27P26842 260 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 ACSL1P33121 698 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 GRIA4P48058 902 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 PSMD8P48556 350 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 C21orf59P57076 290 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 NME3Q13232 169 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 ELAVL3Q14576 367 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 TRIP6Q15654 476 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CST6Q15828 149 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 VWA3BQ502W6 1294 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 ACBD5Q5T8D3 534 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 FAM183BPQ6ZVS7 135 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 SLC26A9Q7LBE3 791 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 RAB44Q7Z6P3 723 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 DEFB106AQ8N104 65 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 TMEM35BQ8NCS4 154 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 SETD7Q8WTS6 366 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 LMLNQ96KR4 655 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 RPRD1AQ96P16 312 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CPXM1Q96SM3 734 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 TUBGCP2Q9BSJ2 902 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 NDST4Q9H3R1 872 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 C6orf106Q9H6K1 298 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 GAREM1Q9H706 876 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 ACP6Q9NPH0 428 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 FBXL12Q9NXK8 326 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 XPO7Q9UIA9 1087 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 SLC25A13Q9UJS0 675 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 DNAJC12Q9UKB3 198 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 RALYQ9UKM9 306 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 FZD4Q9ULV1 537 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 ERVW-1Q9UQF0 538 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 APOBEC2Q9Y235 224 aaKnown RBP9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 PCDHGB2Q9Y5G2 931 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CKAP5Q14008 2032 aa9.15□□□□□ -0.94
CTNNA1-240ENST00000523912 CFAP47Q6ZTR5 3102 aa9.15□□□□□ -0.95
CTNNA1-240ENST00000523912 ANKRD11Q6UB99 2663 aaPredicted RBP9.15□□□□□ -0.95
CTNNA1-240ENST00000523912 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.95
CTNNA1-240ENST00000523912 ITIH6Q6UXX5 1313 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 A0A1B0GVT2 93 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 FAM47DPA6NHR8 397 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 TAF4O00268 1085 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 MID1O15344 667 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 FLRT2O43155 660 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 SH3BP5O60239 455 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 DFNA5O60443 496 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 CLDN11O75508 207 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 GJB3O75712 270 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 GRAP2O75791 330 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 LSM8O95777 96 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 TOP3BO95985 862 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 ERBB2P04626 1255 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 PDGFRAP16234 1089 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 CCT8P50990 548 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 SLC6A3Q01959 620 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 ZNF177Q13360 481 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 KCNJ12Q14500 433 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 HLA-BQ31612 363 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 DPCR1Q3MIW9 517 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 FAM46CQ5VWP2 391 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 KIAA0895LQ68EN5 471 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 OLFML1Q6UWY5 402 aa9.14□□□□□ -0.95
CTNNA1-240ENST00000523912 MMS22LQ6ZRQ5 1243 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms