RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 A0A1B0GVM2 712 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 YJEFN3A6XGL0 299 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 E7ENQ6 273 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 BNIP3LO60238 219 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 NR3C1P04150 777 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 GOT1P17174 413 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 RPS24P62847 133 aaKnown RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 CLDN10P78369 228 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 PDE4CQ08493 712 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 CDH18Q13634 790 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 ZNF542PQ5EBM4 170 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 FSCBQ5H9T9 825 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 PITRM1Q5JRX3 1037 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 C1orf220Q5T0J3 134 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 PIK3R6Q5UE93 754 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 KIAA0907Q7Z7F0 614 aaPredicted RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 CCDC117Q8IWD4 279 aaPredicted RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 SIX6OS1Q8N1H7 587 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 MFSD2AQ8NA29 543 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 IQUBQ8NA54 791 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 GOLGA5Q8TBA6 731 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 RFFLQ8WZ73 363 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 MYEOVQ96EZ4 313 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 MRGPRX3Q96LB0 322 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 FAM129BQ96TA1 746 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 CALN1Q9BXU9 219 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 SYNDIG1Q9H7V2 258 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 POLR1BQ9H9Y6 1135 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 FZD3Q9NPG1 666 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 OLA1Q9NTK5 396 aaKnown RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 PPP4R2Q9NY27 417 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 INTS6Q9UL03 887 aaKnown RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 FZD4Q9ULV1 537 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 FRMD4BQ9Y2L6 1034 aa12.06□□□□□ -0.48
SDCBP-211ENST00000523441 HBS1LQ9Y450 684 aaKnown RBP12.06□□□□□ -0.48
SDCBP-211ENST00000523441 SPTA1P02549 2419 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 EDDM13A0A1B0GTR0 161 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 TYW5A2RUC4 315 aaKnown RBP12.05□□□□□ -0.48
SDCBP-211ENST00000523441 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 AGRPO00253 132 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 SPTLC2O15270 562 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 SLC31A1O15431 190 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 ADH1BP00325 375 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 CD19P15391 556 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 PRLRP16471 622 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 DGKAP23743 735 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 RBMS1P29558 406 aaKnown RBP12.05□□□□□ -0.48
SDCBP-211ENST00000523441 RXRGP48443 463 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 SLC11A2P49281 568 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 RGS7P49802 495 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 VAMP7P51809 220 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 PPP3CAQ08209 521 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 ZNF211Q13398 564 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-211ENST00000523441 CCDC81Q6ZN84 652 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 BHLHA9Q7RTU4 235 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 LSMEM2Q8N112 164 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 SLC4A11Q8NBS3 891 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 HJURPQ8NCD3 748 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-211ENST00000523441 MAPK15Q8TD08 544 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 WBP1Q96G27 269 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 KLHDC7BQ96G42 594 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 PRICKLE1Q96MT3 831 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-211ENST00000523441 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 THSD1Q9NS62 852 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 PTPN13Q12923 2485 aa12.05□□□□□ -0.48
SDCBP-211ENST00000523441 COL12A1Q99715 3063 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 CPED1A4D0V7 1026 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ACSL4O60488 711 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 NEBLO76041 1014 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ASLP04424 464 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 THEGLP0DJG4 465 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
SDCBP-211ENST00000523441 PDCP20941 246 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 SYT1P21579 422 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 C5AR1P21730 350 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 MZF1P28698 734 aaPredicted RBP12.04□□□□□ -0.48
SDCBP-211ENST00000523441 LSSP48449 732 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 CSRP3P50461 194 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 RAD23BP54727 409 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 TBX4P57082 545 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ZNF445P59923 1031 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 STK4Q13043 487 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ACCSLQ4AC99 568 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 FAM133BQ5BKY9 247 aaKnown RBP12.04□□□□□ -0.48
SDCBP-211ENST00000523441 RAB41Q5JT25 222 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 COLEC12Q5KU26 742 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 NADSYN1Q6IA69 706 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 SHC4Q6S5L8 630 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 FIBINQ8TAL6 211 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 TTC17Q96AE7 1141 aa12.04□□□□□ -0.48
SDCBP-211ENST00000523441 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms