RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 OASLQ15646 514 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 ATAT1Q5SQI0 421 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 CCDC137Q6PK04 289 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 GET4Q7L5D6 327 aaPredicted RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 LGI2Q8N0V4 545 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 CELF5Q8N6W0 485 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 NOA1Q8NC60 698 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 SMRP1Q8NCR6 262 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 MYRIPQ8NFW9 859 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 C1orf54Q8WWF1 131 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 ATG4AQ8WYN0 398 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 HAUS1Q96CS2 278 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 OTUB2Q96DC9 234 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 PRICKLE1Q96MT3 831 aaPredicted RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 NECTIN4Q96NY8 510 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 RPRD1AQ96P16 312 aaPredicted RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 OLFM3Q96PB7 478 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 KRT12Q99456 494 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 OBP2AQ9NY56 170 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 DTLQ9NZJ0 730 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 A0A1B0GVM2 712 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 TYW5A2RUC4 315 aaKnown RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 TCAF2A6NFQ2 919 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 HACD1B0YJ81 288 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 NCAM2O15394 837 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ITGAVP06756 1048 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 MX2P20592 715 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CHKAP35790 457 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 LTBRP36941 435 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 MAPKAPK2P49137 400 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 LMNB2Q03252 620 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 GBE1Q04446 702 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 DLX2Q07687 328 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 BYSLQ13895 437 aaKnown RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 TEX35Q5T0J7 233 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 TTC27Q6P3X3 843 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 NPNTQ6UXI9 565 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 MAATS1Q7Z4T9 603 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CDKL3Q8IVW4 592 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ARID3BQ8IVW6 561 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 KLHL7Q8IXQ5 586 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 HJURPQ8NCD3 748 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CCDC26Q8TAB7 109 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 FGF13Q92913 245 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 IGSF8Q969P0 613 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ZSWIM3Q96MP5 696 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 QKIQ96PU8 341 aaKnown RBP eCLIP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 BRD8Q9H0E9 1235 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 TBC1D14Q9P2M4 693 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ZNF212Q9UDV6 495 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 FEZ2Q9UHY8 353 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 DNPEPQ9ULA0 475 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CDH7Q9ULB5 785 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 CCL26Q9Y258 94 aa13.43□□□□□ -0.26
CPNE3-205ENST00000522240 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
CPNE3-205ENST00000522240 GOLGA6L7A0A1B0GV03 622 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 BCLAF3A2AJT9 711 aaKnown RBP13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CFAP69A5D8W1 941 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 FAM187AA6NFU0 413 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 SLC9A3R1O14745 358 aaPredicted RBP13.42□□□□□ -0.26
CPNE3-205ENST00000522240 PPP1R12AO14974 1030 aaPredicted RBP13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CLDN11O75508 207 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 RBP3P10745 1247 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 NDST2P52849 883 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CDH4P55283 916 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 GALNT2Q10471 571 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 PDK1Q15118 436 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 ALFQ53S48 1182 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 MPP7Q5T2T1 576 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 AFMIDQ63HM1 303 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 RFWD3Q6PCD5 774 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 C1orf228Q6PIY5 440 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 SYDE1Q6ZW31 735 aaPredicted RBP13.42□□□□□ -0.26
CPNE3-205ENST00000522240 LRRC49Q8IUZ0 686 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 BBS7Q8IWZ6 715 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 UMODL1-AS1Q8N2C9 162 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 NPWQ8N729 165 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 ATL2Q8NHH9 583 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 RIN3Q8TB24 985 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 UBXN4Q92575 508 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 RUBCNQ92622 972 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 SMARCD2Q92925 531 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 KLC2Q9H0B6 622 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms