RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 HSP90AB1P08238 724 aaKnown RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 TMEM225BP0DP42 221 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 FGF3P11487 239 aaPredicted RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 KRT10P13645 584 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 TPH1P17752 444 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 TFEBP19484 476 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 NTSR1P30989 418 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 MLH1P40692 756 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 CPT1AP50416 773 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 RARSP54136 660 aaKnown RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 SUMO3P55854 103 aaPredicted RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 RRP1P56182 461 aaKnown RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 TEFQ10587 303 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 SPATA2LQ8IUW3 424 aaPredicted RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 UNC5CLQ8IV45 518 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 P3H2Q8IVL5 708 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 SLC35G2Q8TBE7 412 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 NR4A3Q92570 626 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 NEUROG1Q92886 237 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 TRIM43Q96BQ3 446 aaPredicted RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 MED30Q96HR3 178 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 TSPYL4Q9UJ04 414 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 CRB1P82279 1406 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 COL22A1Q8NFW1 1626 aaPredicted RBP4.75□□□□□ -1.65
CLK4-207ENST00000520909 RGPD2P0DJD1 1756 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 MEGF6O75095 1541 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 OVOS2A0A0G2JMS6 1433 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 ST6GAL1P15907 406 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 LTBQ06643 244 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 DNASE1L3Q13609 305 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 CLCA4Q14CN2 919 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 NPNTQ6UXI9 565 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 GSG1LQ6UXU4 331 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 MAEAQ7L5Y9 396 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 TSPYL6Q8N831 410 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 MIB2Q96AX9 1013 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 MSI2Q96DH6 328 aaKnown RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 ABCA3Q99758 1704 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 SF3B5Q9BWJ5 86 aaKnown RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 MOV10Q9HCE1 1003 aaKnown RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 PCDH12Q9NPG4 1184 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 SMC4Q9NTJ3 1288 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 BABAM1Q9NWV8 329 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 CPNE7Q9UBL6 633 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 DKK4Q9UBT3 224 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 AGO2Q9UKV8 859 aaKnown RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 COL14A1Q05707 1796 aaKnown RBP4.74□□□□□ -1.65
CLK4-207ENST00000520909 SPATA31A5Q5VU36 1347 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 RNF123Q5XPI4 1314 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 SPATA31A7Q8IWB4 1347 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 PCDH11XQ9BZA7 1347 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 PCDH11YQ9BZA8 1340 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 LMO7Q8WWI1 1683 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 EVPLQ92817 2033 aa4.74□□□□□ -1.65
CLK4-207ENST00000520909 FAM227AF5H4B4 570 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 TCERG1O14776 1098 aaKnown RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 KCNQ3O43525 872 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 ZKSCAN1P17029 563 aaPredicted RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 ACVR2AP27037 513 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 CNGA3Q16281 694 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 KRT24Q2M2I5 525 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 TWISTNBQ3B726 338 aaPredicted RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 MZT2AQ6P582 158 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 YAF2Q8IY57 180 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 FRAT1Q92837 279 aaPredicted RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 NMD3Q96D46 503 aaKnown RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 PRR11Q96HE9 360 aaPredicted RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 LRGUKQ96M69 825 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 AIFM3Q96NN9 605 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 THSD1Q9NS62 852 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 STK32BQ9NY57 414 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 THRAP3Q9Y2W1 955 aaKnown RBP4.73□□□□□ -1.65
CLK4-207ENST00000520909 COL4A3BPQ9Y5P4 624 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 AFF2P51816 1311 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 CEMIPQ8WUJ3 1361 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 PLEKHG2Q9H7P9 1386 aa4.73□□□□□ -1.65
CLK4-207ENST00000520909 ATG13O75143 517 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 INMTO95050 263 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 IGKV3-20P01619 116 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 MBPP02686 304 aaPredicted RBP4.72□□□□□ -1.65
CLK4-207ENST00000520909 RBL1P28749 1068 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 VPS41P49754 854 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 ENTPD1P49961 510 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 SLC39A6Q13433 755 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 KEAP1Q14145 624 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 DLGAP5Q15398 846 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 C20orf194Q5TEA3 1177 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 NUGGCQ68CJ6 796 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 GRHL2Q6ISB3 625 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 NR2C2APQ86WQ0 139 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
CLK4-207ENST00000520909 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 ZDHHC12Q96GR4 267 aa4.72□□□□□ -1.65
CLK4-207ENST00000520909 GJB4Q9NTQ9 266 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms