RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CTAGE8P0CG41 777 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 H2AFXP16104 143 aaPredicted RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 RPL17P18621 184 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 TFE3P19532 575 aaPredicted RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 FUT4P22083 530 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 IL1R2P27930 398 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 MIPP30301 263 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PCK1P35558 622 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PTPN9P43378 593 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 GPR15P49685 360 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 ARPP19P56211 112 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 RWDD2BP57060 319 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 YWHAZP63104 245 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 DSG1Q02413 1049 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SMARCB1Q12824 385 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 TERF2Q15554 542 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PSMD5Q16401 504 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 C15orf59Q2T9L4 293 aaPredicted RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SPOUT1Q5T280 376 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 ZBTB37Q5TC79 503 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 OTUD1Q5VV17 481 aaPredicted RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SYPL2Q5VXT5 272 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF771Q7L3S4 317 aaPredicted RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 BNIPLQ7Z465 357 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 ANKS1BQ7Z6G8 1248 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 CTAGE6Q86UF2 777 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 CTAGE4Q8IX94 777 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 RHOT1Q8IXI2 618 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 KATNAL2Q8IYT4 538 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 ZDHHC14Q8IZN3 488 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SIX6OS1Q8N1H7 587 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 NOA1Q8NC60 698 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 MNS1Q8NEH6 495 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SPATA4Q8NEY3 305 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 IRGQQ8WZA9 623 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 NT5C3BQ969T7 300 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 TMEM169Q96HH4 297 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 C8orf48Q96LL4 319 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 RNPC3Q96LT9 517 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 CFAP57Q96MR6 1250 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PGLYRP2Q96PD5 576 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PEBP4Q96S96 227 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 RAD9AQ99638 391 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 DDX23Q9BUQ8 820 aaKnown RBP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 IL37Q9NZH6 218 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 CALCOCO1Q9P1Z2 691 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 NR2E1Q9Y466 385 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 PCDHB5Q9Y5E4 795 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 SNX11Q9Y5W9 270 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 CDY1Q9Y6F8 540 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 DOCK4Q8N1I0 1966 aa8.18□□□□□ -1.1
CTHRC1-203ENST00000520337 TCRBV7S2A1N4TA0A589 114 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 WDR27A2RRH5 827 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 C3orf70A6NLC5 250 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PGRMC1O00264 195 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 DAB1O75553 588 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SOAT2O75908 522 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 FGF18O76093 207 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 ENDOD1O94919 500 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 ABLIM3O94929 683 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 TRUB2O95900 331 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 FGGP02679 453 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 HAPLN1P10915 354 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 ATP2A2P16615 1042 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SDC4P31431 198 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 OR1D2P34982 312 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PPM1AP35813 382 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 MATKP42679 507 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PAFAH1B1P43034 410 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SSR1P43307 286 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 GLUD2P49448 558 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PGFP49763 221 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 HDAC4P56524 1084 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 PITX1P78337 314 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 ROR1Q01973 937 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 TAGLNQ01995 201 aaKnown RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 C2orf54Q08AI8 447 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 DUSP4Q13115 394 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SIX1Q15475 284 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 TAZQ16635 292 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 DDR2Q16832 855 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 ERCC6LQ2NKX8 1250 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SDHAF4Q5VUM1 108 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 KIAA1841Q6NSI8 718 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 POLNQ7Z5Q5 900 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SCD5Q86SK9 330 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 SCN4BQ8IWT1 228 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 RCOR2Q8IZ40 523 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 DEFB106AQ8N104 65 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 VPS52Q8N1B4 723 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 CMASQ8NFW8 434 aaPredicted RBP8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 EXD1Q8NHP7 514 aa8.17□□□□□ -1.1
CTHRC1-203ENST00000520337 C2orf15Q8WU43 125 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms