RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 UNC5AQ6ZN44 842 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 C14orf80Q86SX3 495 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 ARHGAP12Q8IWW6 846 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 LZTR1Q8N653 840 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 ANKRD42Q8N9B4 389 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 ZSCAN18Q8TBC5 510 aaPredicted RBP18.95■□□□□ 0.62
FAM49B-214ENST00000519540 TOP1MTQ969P6 601 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 CHMP6Q96FZ7 201 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 ZNF317Q96PQ6 595 aaPredicted RBP18.95■□□□□ 0.62
FAM49B-214ENST00000519540 VAT1Q99536 393 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 OLA1Q9NTK5 396 aaKnown RBP18.95■□□□□ 0.62
FAM49B-214ENST00000519540 RSPH14Q9UHP6 348 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 BACE2Q9Y5Z0 518 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 MAD1L1Q9Y6D9 718 aa18.95■□□□□ 0.62
FAM49B-214ENST00000519540 COL4A6Q14031 1691 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 RPL17P18621 184 aaKnown RBP18.94■□□□□ 0.62
FAM49B-214ENST00000519540 ZBTB17Q13105 803 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 LRRC14Q15048 493 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 PSMD5Q16401 504 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 PIK3R6Q5UE93 754 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 MGARPQ8TDB4 240 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 GIPC2Q8TF65 315 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 SLC44A1Q8WWI5 657 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 TSGA13Q96PP4 275 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 GORASP1Q9BQQ3 440 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 FAM107BQ9H098 131 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 KIF9Q9HAQ2 790 aa18.94■□□□□ 0.62
FAM49B-214ENST00000519540 SLC38A8A6NNN8 435 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 ATF6P18850 670 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 PRKCHP24723 683 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 CD68P34810 354 aaPredicted RBP18.93■□□□□ 0.62
FAM49B-214ENST00000519540 OR1D2P34982 312 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 IFNAR2P48551 515 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 MZB1Q8WU39 189 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 AGAP3Q96P47 875 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 ABHD14A-ACY1A0A1B0GW23 586 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 SDR42E2A6NKP2 422 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 APOEP02649 317 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 ZDHHC11BP0C7U3 371 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 CCNCP24863 283 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 TRIP4Q15650 581 aaPredicted RBP18.93■□□□□ 0.62
FAM49B-214ENST00000519540 C10orf120Q5SQS8 335 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 ZNF689Q96CS4 500 aaPredicted RBP18.93■□□□□ 0.62
FAM49B-214ENST00000519540 STAMBPL1Q96FJ0 436 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 TEKT5Q96M29 485 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 TRIM56Q9BRZ2 755 aaKnown RBP18.93■□□□□ 0.62
FAM49B-214ENST00000519540 SLC39A8Q9C0K1 460 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 NDFIP2Q9NV92 336 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 NKIRAS1Q9NYS0 192 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 MARCH2Q9P0N8 246 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 SHROOM3Q8TF72 1996 aa18.93■□□□□ 0.62
FAM49B-214ENST00000519540 FAM47DPA6NHR8 397 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 DFFAO00273 331 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 PRPF4O43172 522 aaKnown RBP eCLIP18.92■□□□□ 0.62
FAM49B-214ENST00000519540 JCHAINP01591 159 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 DRD4P21917 467 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 GJA8P48165 433 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 SLC18A1P54219 525 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 KIAA1841Q6NSI8 718 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 ARHGAP36Q6ZRI8 547 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 MIB1Q86YT6 1006 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 ZNF683Q8IZ20 524 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 C4orf33Q8N1A6 199 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 RTL3Q8N8U3 475 aaKnown RBP18.92■□□□□ 0.62
FAM49B-214ENST00000519540 GSDMBQ8TAX9 411 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 TTLL2Q9BWV7 592 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 GBA3Q9H227 469 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 MLXIPLQ9NP71 852 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 MPP6Q9NZW5 540 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 PCDHA11Q9Y5I1 949 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 IKBKGQ9Y6K9 419 aa18.92■□□□□ 0.62
FAM49B-214ENST00000519540 WASH4PA8MWX3 477 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 EBAG9O00559 213 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SPAG7O75391 227 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SUN1O94901 812 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SPARCL1Q14515 664 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 QPCTQ16769 361 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 LRRC26Q2I0M4 334 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 MS4A13Q5J8X5 152 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 AFMIDQ63HM1 303 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ITPRIPL1Q6GPH6 555 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 TMCO2Q7Z6W1 182 aaPredicted RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ATP6V0D2Q8N8Y2 350 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 DYDC1Q8WWB3 177 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 PAWRQ96IZ0 340 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 CEP295NLQ96MC4 621 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 CLSTN3Q9BQT9 956 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 UBE2OQ9C0C9 1292 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 CXorf49A8MYA2 514 aaPredicted RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 C2CD2LO14523 706 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 AP2A1O95782 977 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 INHBAP08476 426 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 NFKB1P19838 968 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 ITGB8P26012 769 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 MGAT1P26572 445 aa18.91■□□□□ 0.62
FAM49B-214ENST00000519540 TUFMP49411 452 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SESN2P58004 480 aaPredicted RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 SPOUT1Q5T280 376 aaKnown RBP18.91■□□□□ 0.62
FAM49B-214ENST00000519540 KCTD11Q693B1 232 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms