RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CRTAMO95727 393 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 NPY2RP49146 381 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 HPCAP84074 193 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SLC6A3Q01959 620 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 AGAP9Q5VTM2 703 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 FAM43BQ6ZT52 329 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CLEC4FQ8N1N0 589 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 UBR7Q8N806 425 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 GIPC3Q8TF64 312 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 FAM136AQ96C01 138 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 WNK4Q96J92 1243 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ZBTB18Q99592 522 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 HERPUD2Q9BSE4 406 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PLEKHA5Q9HAU0 1116 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CACNA1SQ13698 1873 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF839A8K0R7 811 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 E5RJQ4 531 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 SLC22A2O15244 555 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 VAPBO95292 243 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ERVK-10P10266 1014 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 MYH1P12882 1939 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 IL1RL1Q01638 556 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 USP4Q13107 963 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 C15orf59Q2T9L4 293 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 C6orf52Q5T4I8 152 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 FRA10AC1Q70Z53 315 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 AMIGO2Q86SJ2 522 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 KCNMB4Q86W47 210 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 XYLT1Q86Y38 959 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM126BQ8IUX1 230 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC60Q8IWA6 550 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 LRRC71Q8N4P6 559 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 PLD5Q8N7P1 536 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 MAGED4Q96JG8 741 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF560Q96MR9 790 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 C1orf50Q9BV19 199 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 EIF2AQ9BY44 585 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 OSBPL6Q9BZF3 934 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 TRPC7Q9HCX4 862 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 SNX15Q9NRS6 342 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 VPS45Q9NRW7 570 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ATAD3AQ9NVI7 634 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF229Q9UJW7 825 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 MYH4Q9Y623 1939 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ROBO1Q9Y6N7 1651 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 NHSL1Q5SYE7 1610 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 NFASCO94856 1347 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 GOLGA8CPA6NN73 597 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CCNE2O96020 404 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CYP2C9P11712 490 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 TCF4P15884 667 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ITGAXP20702 1163 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CSE1LP55060 971 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CDH8P55286 799 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ATP1A4Q13733 1029 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 KCNJ11Q14654 390 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ADCK1Q86TW2 530 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 RBM12BQ8IXT5 1001 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 URGCPQ8TCY9 931 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 SGF29Q96ES7 293 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 SNRNP25Q9BV90 132 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 IL1RL2Q9HB29 575 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CYLDQ9NQC7 956 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 DPP3Q9NY33 737 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 PLA2G4CQ9UP65 541 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 PCDHB12Q9Y5F1 795 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 BCORQ6W2J9 1755 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 M0R3G1 203 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 NCAM2O15394 837 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 MAN1A2O60476 641 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 VNN1O95497 513 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CD48P09326 243 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CSH1P0DML2 217 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CSH2P0DML3 217 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ACO1P21399 889 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 AVPR1AP37288 418 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 LIPMQ5VYY2 423 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 IFNEQ86WN2 208 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ERI1Q8IV48 349 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF516Q92618 1163 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 DNAJC1Q96KC8 554 aaKnown RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 LENG8Q96PV6 779 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-203ENST00000517490 MKS1Q9NXB0 559 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 ATP11BQ9Y2G3 1177 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC88AQ3V6T2 1871 aa6.8□□□□□ -1.32
CPNE3-203ENST00000517490 H0Y626 953 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 FAM189A1O60320 539 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ATP6V1G1O75348 118 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM16O95361 564 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ERBB2P04626 1255 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 RBP1P09455 135 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DHRS4L1P0CG22 281 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 DNAJB2P25686 324 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 ARHGDIAP52565 204 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 NDST1P52848 882 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 KCNK10P57789 538 aa6.79□□□□□ -1.32
CPNE3-203ENST00000517490 CCNA1P78396 465 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms