RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ZNF843Q8N446 348 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 OR52N4Q8NGI2 321 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 LINC00479Q96M42 142 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 C17orf77Q96MU5 243 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 ASCL2Q99929 193 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 VGLL1Q99990 258 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 EBF2Q9HAK2 575 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 PNRC2Q9NPJ4 139 aaKnown RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 OGFRQ9NZT2 677 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 GABBR1Q9UBS5 961 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC27A6Q9Y2P4 619 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 RAI2Q9Y5P3 530 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 GREB1LQ9C091 1923 aaPredicted RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 ATXN2Q99700 1313 aaKnown RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 IGHV4-28A0A0C4DH34 117 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 NDUFAF8A1L188 74 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PMS2P5A8MQ11 134 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 MCIDASD6RGH6 385 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 H3BUI4 141 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PRKNO60260 465 aaPredicted RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA12O60330 932 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 NEURL1O76050 574 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 WDR47O94967 919 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 NFATC1O95644 943 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 RFPL3SP0C7P2 107 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 TMEM225BP0DP42 221 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZBTB25P24278 435 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 C21orf33P30042 268 aaPredicted RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 NTSR1P30989 418 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 TNFSF8P32971 234 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 THPOP40225 353 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PEX5P50542 639 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 COPAP53621 1224 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZBTB16Q05516 673 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PMPCAQ10713 525 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 CTBP1Q13363 440 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 BMS1Q14692 1282 aaKnown RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 CLCA4Q14CN2 919 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 UGP2Q16851 508 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 CACHD1Q5VU97 1274 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 LMBRD2Q68DH5 695 aaPredicted RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PGM2L1Q6PCE3 622 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZDHHC24Q6UX98 284 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 CLEC9AQ6UXN8 241 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 LHFPL2Q6ZUX7 228 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 CDC20BQ86Y33 519 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF584Q8IVC4 421 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC25A41Q8N5S1 370 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 UBR7Q8N806 425 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 FGFBP3Q8TAT2 258 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 BICD2Q8TD16 824 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 COG1Q8WTW3 980 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ASB12Q8WXK4 309 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 KLHL29Q96CT2 875 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF419Q96HQ0 510 aaPredicted RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 RBM4BQ9BQ04 359 aaKnown RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 TRIM2Q9C040 744 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 B3GNT4Q9C0J1 378 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PTPRHQ9HD43 1115 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC8A2Q9UPR5 921 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF711Q9Y462 761 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHB2Q9Y5E7 798 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA9Q9Y5G4 932 aaKnown RBP0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA8Q9Y5G5 932 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA7Q9Y5G6 932 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA6Q9Y5G7 932 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHGA3Q9Y5H0 932 aa0.68□□□□□ -2.3
SCARNA23-201ENST00000516060 FRMPD2Q68DX3 1309 aaPredicted RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 A0A0U1RQJ8 604 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 TMEM233B4DJY2 109 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 STMND1H3BQB6 276 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 NR5A2O00482 541 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 RRP9O43818 475 aaKnown RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 MAP4K4O95819 1239 aaPredicted RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 HNRNPA1P09651 372 aaKnown RBP eCLIP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 PATE4P0C8F1 98 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 CETPP11597 493 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 AGTR2P50052 363 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 NLRP5P59047 1200 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 MTAPQ13126 283 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 PEX6Q13608 980 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 CAPRIN1Q14444 709 aaKnown RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 INSCQ1MX18 579 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 INAVAQ3KP66 663 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 SETMARQ53H47 684 aaPredicted RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 NOP9Q86U38 636 aaKnown RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 ADIPOR2Q86V24 386 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 LAS2Q8IYD9 372 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 PGBD5Q8N414 524 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 Q8N7P7 452 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 C1orf162Q8NEQ5 155 aaPredicted RBP0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 OR13A1Q8NGR1 328 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 NPIPB3Q92617 1050 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 APPBP2Q92624 585 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC35A4Q96G79 324 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 MRFAP1L1Q96HT8 127 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 SNX27Q96L92 541 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 MRGPRX1Q96LB2 322 aa0.67□□□□□ -2.3
SCARNA23-201ENST00000516060 LINC00167Q96N53 147 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms