RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RSPH9Q9H1X1 276 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 DNAAF2Q9NVR5 837 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 EIF2B4Q9UI10 523 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 INTS6Q9UL03 887 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 PAXBP1Q9Y5B6 917 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 A0A1B0GVM2 712 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 TCAF2A6NFQ2 919 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 SIN3BO75182 1162 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 LSM8O95777 96 aaKnown RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 F9P00740 461 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 UCHL3P15374 230 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 PDGFRAP16234 1089 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 ACSL1P33121 698 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 KCNMA1Q12791 1236 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 GRIK2Q13002 908 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 SLC14A1Q13336 389 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 ZNF177Q13360 481 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 AUHQ13825 339 aaKnown RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 ARID5BQ14865 1188 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 TEAD4Q15561 434 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 USP30Q70CQ3 517 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 CCAR2Q8N163 923 aaKnown RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 ANKRD20A12PQ8NF67 263 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 MRGPRX3Q96LB0 322 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 PRMT1Q99873 361 aaKnown RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 OMDQ99983 421 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 VPS16Q9H269 839 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 MTG2Q9H4K7 406 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 C6orf106Q9H6K1 298 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-215ENST00000515516 WDCPQ9H6R7 721 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 FBXL12Q9NXK8 326 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 PCDHB9Q9Y5E1 797 aa14.1□□□□□ -0.15
TCOF1-215ENST00000515516 TTC34A8MYJ7 566 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 FSBPO95073 299 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 CER1O95813 267 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 CTSOP43234 321 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 SULT1E1P49888 294 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 AFF3P51826 1226 aaKnown RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 SIM1P81133 766 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 DEUP1Q05D60 604 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 CST6Q15828 149 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 BRMS1LQ5PSV4 323 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 C9orf64Q5T6V5 341 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 FAM102AQ5T9C2 384 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 FBXL22Q6P050 247 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 PIP4P1Q86T03 277 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 CIR1Q86X95 450 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 APCDD1Q8J025 514 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 OR2I1PQ8NGU4 316 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 MYO19Q96H55 970 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 RPL10LQ96L21 214 aaKnown RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-215ENST00000515516 SIK2Q9H0K1 926 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 ANO10Q9NW15 660 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 SLCO3A1Q9UIG8 710 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 VANGL2Q9ULK5 521 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 HS3ST4Q9Y661 456 aa14.09□□□□□ -0.15
TCOF1-215ENST00000515516 MYO18AQ92614 2054 aaKnown RBP14.08□□□□□ -0.15
TCOF1-215ENST00000515516 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 LRRC72A6NJI9 287 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 F8VZ95 297 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 MID1O15344 667 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 PAGE1O75459 146 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 CLDN11O75508 207 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 RNASEH2AO75792 299 aaKnown RBP14.08□□□□□ -0.16
TCOF1-215ENST00000515516 ADH1BP00325 375 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 C7P10643 843 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 SLC8A1P32418 973 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 CDH5P33151 784 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-215ENST00000515516 SCNN1AP37088 669 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 GABRB2P47870 512 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 PLK1P53350 603 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 ACCSLQ4AC99 568 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-215ENST00000515516 DPY19L2P1Q6NXN4 242 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 LRRC31Q6UY01 552 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 ZNF677Q86XU0 584 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 NAA15Q9BXJ9 866 aaKnown RBP14.08□□□□□ -0.16
TCOF1-215ENST00000515516 TKTL2Q9H0I9 626 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 SLC25A13Q9UJS0 675 aa14.08□□□□□ -0.16
TCOF1-215ENST00000515516 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-215ENST00000515516 SPTBN2O15020 2390 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 A0A1W2PP55 124 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 GOLGA8SH3BPF8 625 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 IL1BP01584 269 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CD59P13987 128 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 ZNF18P17022 549 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CDK11BP21127 795 aaKnown RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CD27P26842 260 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 MZF1P28698 734 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 PSMD8P48556 350 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CDH4P55283 916 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms