RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 TAS1R2Q8TE23 839 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 RNF139Q8WU17 664 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 NDRG1Q92597 394 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 EDEM1Q92611 657 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 PRICKLE1Q96MT3 831 aaPredicted RBP11.35□□□□□ -0.59
DDX41-216ENST00000513562 BLZF1Q9H2G9 400 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 MAGEF1Q9HAY2 307 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 TJP2Q9UDY2 1190 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 ERVW-1Q9UQF0 538 aa11.35□□□□□ -0.59
DDX41-216ENST00000513562 BOD1L1Q8NFC6 3051 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3DA0A087WVF3 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3IA0A087WXS9 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3EA0A087X179 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3KA0A087X1G2 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 GOLGA6L7A0A1B0GV03 622 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3FA6NER0 549 aaPredicted RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3LB9A6J9 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TULP2O00295 520 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TERTO14746 1132 aaKnown RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3HP0C7X1 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 GIMD1P0DJR0 217 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 CTSOP43234 321 aaPredicted RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 SLC11A2P49281 568 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 SLC8A3P57103 927 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 ELAVL3Q14576 367 aaKnown RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 STAT4Q14765 748 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 HS1BP3Q53T59 392 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 PITRM1Q5JRX3 1037 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 BSPRYQ5W0U4 402 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3GQ6DHY5 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3CQ6IPX1 549 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TRIM69Q86WT6 500 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 TBC1D3Q8IZP1 549 aaPredicted RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 STK40Q8N2I9 435 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 HJURPQ8NCD3 748 aaPredicted RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
DDX41-216ENST00000513562 TRIM4Q9C037 500 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 UCKL1Q9NWZ5 548 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 STIM2Q9P246 746 aa11.34□□□□□ -0.59
DDX41-216ENST00000513562 LY6G6EA0A0G2JKS1 128 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 A0A1W2PNU3 283 aaPredicted RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 E7ENQ6 273 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 XPO1O14980 1071 aaKnown RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 FFAR2O15552 330 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 SLC7A4O43246 635 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 PLRG1O43660 514 aaKnown RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 ACSL4O60488 711 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 IL1BP01584 269 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 NR3C1P04150 777 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 MAT2AP31153 395 aaKnown RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 GCLMP48507 274 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 VAMP7P51809 220 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 RAD23BP54727 409 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 ADIGQ0VDE8 80 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 NFATC3Q12968 1075 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 CUL4BQ13620 913 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 CDH18Q13634 790 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 FSCBQ5H9T9 825 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 COLEC12Q5KU26 742 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 NUGGCQ68CJ6 796 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 NADSYN1Q6IA69 706 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 MSANTD2Q6P1R3 559 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 UNC45BQ8IWX7 931 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 TTC39CQ8N584 583 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 EXD3Q8N9H8 876 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 TMEM145Q8NBT3 493 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 PTPRN2Q92932 1015 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 TATDN2Q93075 761 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 AZIN2Q96A70 460 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 FAXDC2Q96IV6 333 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 USP29Q9HBJ7 922 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 LRRC4Q9HBW1 653 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 ABCC13Q9NSE7 274 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 SLCO3A1Q9UIG8 710 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 HEMK1Q9Y5R4 338 aaPredicted RBP11.33□□□□□ -0.6
DDX41-216ENST00000513562 U3KQA8 63 aa11.33□□□□□ -0.6
DDX41-216ENST00000513562 TYW5A2RUC4 315 aaKnown RBP11.32□□□□□ -0.6
DDX41-216ENST00000513562 PRAMEF26H0Y7S4 382 aa11.32□□□□□ -0.6
DDX41-216ENST00000513562 PDXKO00764 312 aa11.32□□□□□ -0.6
DDX41-216ENST00000513562 MAPK13O15264 365 aa11.32□□□□□ -0.6
DDX41-216ENST00000513562 PPP6R2O75170 966 aa11.32□□□□□ -0.6
DDX41-216ENST00000513562 RTN2O75298 545 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms