RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 SLC36A4Q6YBV0 504 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 PGBD3Q8N328 593 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 FRMD1Q8N878 549 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 RNF139Q8WU17 664 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 UBXN4Q92575 508 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 NDRG1Q92597 394 aaKnown RBP10.24□□□□□ -0.77
CCL28-203ENST00000513525 KAT5Q92993 513 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 BHMTQ93088 406 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 PIWIL1Q96J94 861 aaKnown RBP10.24□□□□□ -0.77
CCL28-203ENST00000513525 HSFY1Q96LI6 401 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 SPAG5Q96R06 1193 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 ZSWIM1Q9BR11 485 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 CARD6Q9BX69 1037 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 SIX2Q9NPC8 291 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 CNTN6Q9UQ52 1028 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 CHD8Q9HCK8 2581 aa10.24□□□□□ -0.77
CCL28-203ENST00000513525 IGHV1OR15-9A0A0B4J2B8 117 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 FERP16591 822 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 NDUFV2P19404 249 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 SLC9A1P19634 815 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 MAGEA1P43355 309 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 RPL34P49207 117 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 HARS2P49590 506 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 JAM2P57087 298 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 KLHL30Q0D2K2 578 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 SLC18A3Q16572 532 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 GEN1Q17RS7 908 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 MPPE1Q53F39 396 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PAPD7Q5XG87 772 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 KIAA1211LQ6NV74 962 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PMF1Q6P1K2 205 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 ANKS1BQ7Z6G8 1248 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 METTL3Q86U44 580 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 SYT12Q8IV01 421 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 ARHGEF19Q8IW93 802 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 DOCK4Q8N1I0 1966 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 RBBP8NLQ8NC74 664 aaPredicted RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 TRIM58Q8NG06 486 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 UCMAQ8WVF2 138 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 KREMEN1Q96MU8 473 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 LACRTQ9GZZ8 138 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 CACNA2D2Q9NY47 1150 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 THAP10Q9P2Z0 257 aaPredicted RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 KMT2BQ9UMN6 2715 aaPredicted RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PATE3B3GLJ2 98 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 M0QYV0 167 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 ZBTB24O43167 697 aaPredicted RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 FBXO21O94952 628 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 IGLV3-27P01718 113 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 LTFP02788 710 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 CCDC172P0C7W6 258 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 LCP1P13796 627 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 BRD2P25440 801 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 HOXD9P28356 352 aaPredicted RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 STAT1P42224 750 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PTGER3P43115 390 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 RING1Q06587 406 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 LYSMD4Q5XG99 296 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 SMYD5Q6GMV2 418 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 VPS36Q86VN1 386 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 TMEFF1Q8IYR6 380 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 DDI1Q8WTU0 396 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 EDEM1Q92611 657 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PIGKQ92643 395 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 GOLGA1Q92805 767 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 MRGPRX1Q96LB2 322 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 ALS2CR12Q96Q35 445 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 STK33Q9BYT3 514 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 INTS2Q9H0H0 1204 aaKnown RBP10.23□□□□□ -0.77
CCL28-203ENST00000513525 PDCL3Q9H2J4 239 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 TMEM9BQ9NQ34 198 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 TRIM10Q9UDY6 481 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 SFMBT1Q9UHJ3 866 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 PILRBQ9UKJ0 227 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 FHOD1Q9Y613 1164 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 STON1Q9Y6Q2 735 aa10.23□□□□□ -0.77
CCL28-203ENST00000513525 EPG5Q9HCE0 2579 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 CACNA1BQ00975 2339 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 C4orf47A7E2U8 309 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 BTNL10A8MVZ5 291 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 WASH3PC4AMC7 463 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 CDX4O14627 284 aaPredicted RBP10.22□□□□□ -0.77
CCL28-203ENST00000513525 IL12RB1P42701 662 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 GPD2P43304 727 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 RGS7P49802 495 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 IRX4P78413 519 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 RPL6Q02878 288 aaKnown RBP10.22□□□□□ -0.77
CCL28-203ENST00000513525 LMAN2Q12907 356 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 STARD3Q14849 445 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 ADGRF1Q5T601 910 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 DAB2IPQ5VWQ8 1189 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 SLC23A3Q6PIS1 610 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 UNC45BQ8IWX7 931 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 AZIN2Q96A70 460 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 FAM81BQ96LP2 452 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms