RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 OLA1Q9NTK5 396 aaKnown RBP10.89□□□□□ -0.67
CLDND1-227ENST00000513452 ARHGAP20Q9P2F6 1191 aa10.89□□□□□ -0.67
CLDND1-227ENST00000513452 SFMBT1Q9UHJ3 866 aa10.89□□□□□ -0.67
CLDND1-227ENST00000513452 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
CLDND1-227ENST00000513452 INTS6Q9UL03 887 aaKnown RBP10.89□□□□□ -0.67
CLDND1-227ENST00000513452 USP9XQ93008 2570 aaPredicted RBP10.89□□□□□ -0.67
CLDND1-227ENST00000513452 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
CLDND1-227ENST00000513452 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 GOLGA6L7A0A1B0GV03 622 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 TARSL2A2RTX5 802 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 VPS37CA5D8V6 355 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 RTN2O75298 545 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ZBED1O96006 694 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 CENPBP07199 599 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 GP1BAP07359 652 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ALPPL2P10696 532 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 MZF1P28698 734 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 SLC6A4P31645 630 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 DRD3P35462 400 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 CTSOP43234 321 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 TKTL1P51854 596 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 METAP1P53582 386 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 LINC00303Q3SY05 128 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 KMT5BQ4FZB7 885 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ZNF394Q53GI3 561 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 RAB41Q5JT25 222 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 PIK3R6Q5UE93 754 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 MMS22LQ6ZRQ5 1243 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 BHLHA9Q7RTU4 235 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ZNF557Q8N988 423 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 IFI44Q8TCB0 444 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 RNF139Q8WU17 664 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 KLHDC7BQ96G42 594 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 LMLNQ96KR4 655 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 CCNL2Q96S94 520 aaPredicted RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ULBP1Q9BZM6 244 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 IMPG2Q9BZV3 1241 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 STARD5Q9NSY2 213 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 CGNQ9P2M7 1197 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 TJP2Q9UDY2 1190 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 ERVW-1Q9UQF0 538 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 DMTF1Q9Y222 760 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 CEP83Q9Y592 693 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 FLNCQ14315 2725 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
CLDND1-227ENST00000513452 BOD1L1Q8NFC6 3051 aa10.88□□□□□ -0.67
CLDND1-227ENST00000513452 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 LY6G6EA0A0G2JKS1 128 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 CDRT15L2A8MXV6 281 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 SUV39H1O43463 412 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 PIAS2O75928 621 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 GP1BBP13224 206 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 TGM2P21980 687 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 NUDT1P36639 197 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 CDH18Q13634 790 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 ARL13BQ3SXY8 428 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 SETMARQ53H47 684 aaPredicted RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 PITRM1Q5JRX3 1037 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 MPP7Q5T2T1 576 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 RNF219Q5W0B1 726 aaPredicted RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 CARNMT1Q8N4J0 409 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 KDM1BQ8NB78 822 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 HJURPQ8NCD3 748 aaPredicted RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 FIBINQ8TAL6 211 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 EXTL1Q92935 676 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 PRICKLE1Q96MT3 831 aaPredicted RBP10.87□□□□□ -0.67
CLDND1-227ENST00000513452 DNAI2Q9GZS0 605 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 CYP3A43Q9HB55 503 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 NLGN3Q9NZ94 848 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 ENTPD2Q9Y5L3 495 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 U3KQA8 63 aa10.87□□□□□ -0.67
CLDND1-227ENST00000513452 ITIH6Q6UXX5 1313 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 PRAMEF26H0Y7S4 382 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 TULP2O00295 520 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 PLRG1O43660 514 aaKnown RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 LZTS3O60299 673 aaPredicted RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 AFPP02771 609 aaKnown RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 SRPRAP08240 638 aaKnown RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 FAM87AP0C7U9 286 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 THEGLP0DJG4 465 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 VAV1P15498 845 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 PRLRP16471 622 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 STK19P49842 368 aaPredicted RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 DUSP3P51452 185 aaPredicted RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 RPS24P62847 133 aaKnown RBP10.86□□□□□ -0.67
CLDND1-227ENST00000513452 AMPD3Q01432 767 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
CLDND1-227ENST00000513452 ELAVL3Q14576 367 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms