RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DCTPP1Q9H773 170 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 NCOA5Q9HCD5 579 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 FANCLQ9NW38 375 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 UNC79Q9P2D8 2635 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 MAD2L2Q9UI95 211 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 TLK1Q9UKI8 766 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PLAAQ9Y263 795 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 BPTFQ12830 3046 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 SPAG17Q6Q759 2223 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 PCNX2A6NKB5 2137 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 MYH9P35579 1960 aaKnown RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CNTNAP2Q9UHC6 1331 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CAPN8A6NHC0 703 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 SHISA7A6NL88 538 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 K7ESF4 209 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 TGM5O43548 720 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 STC2O76061 302 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 C22orf31O95567 290 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 SRGAP2CP0DJJ0 459 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CHRNB1P11230 501 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC11A1P49279 550 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 WNT3AP56704 352 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 LRRC32Q14392 662 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 SF3A2Q15428 464 aaKnown RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 USP41Q3LFD5 358 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 IFIT1BQ5T764 474 aaKnown RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 FOXB2Q5VYV0 432 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 EFCAB12Q6NXP0 572 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CC2D1AQ6P1N0 951 aaPredicted RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 USP17L6PQ6QN14 398 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 GET4Q7L5D6 327 aaPredicted RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 KIAA0907Q7Z7F0 614 aaPredicted RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 MRPL10Q7Z7H8 261 aaKnown RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 WDR5BQ86VZ2 330 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 PALB2Q86YC2 1186 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 METTL13Q8N6R0 699 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 LINC01465Q8N7H1 131 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CNNM3Q8NE01 707 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 URGCPQ8TCY9 931 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 GAB3Q8WWW8 586 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 FAM3CQ92520 227 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 EVI5LQ96CN4 794 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 DYDC2Q96IM9 177 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 MXRA8Q9BRK3 442 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 HERC2P3Q9BVR0 1158 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 COLEC11Q9BWP8 271 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 GCOM2Q9BZD3 368 aaPredicted RBP4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 PSTPIP2Q9H939 334 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF302Q9NR11 478 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 HEBP1Q9NRV9 189 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 NRBP2Q9NSY0 501 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 DNAJB4Q9UDY4 337 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 CLCA2Q9UQC9 943 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 WDFY3Q8IZQ1 3526 aa4.07□□□□□ -1.76
PDLIM5-218ENST00000513341 BAZ2BQ9UIF8 2168 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 DOCK6Q96HP0 2047 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 C4orf47A7E2U8 309 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 B4E1Z4 1266 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 CYTH3O43739 400 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 ATG13O75143 517 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 DDHD2O94830 711 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MATN4O95460 622 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 NPTXRO95502 500 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 ASMTLO95671 621 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 FOSP01100 380 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 VTNP04004 478 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SPATA31D3P0C874 917 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 EGR2P11161 476 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 PSMC3P17980 439 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SFPQP23246 707 aaKnown RBP eCLIP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MPLP40238 635 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 DNM2P50570 870 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 GPC3P51654 580 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 HAND2P61296 217 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SATB1Q01826 763 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 GUCY1B3Q02153 619 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 TROAPQ12815 778 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MPP3Q13368 585 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 HNRNPDQ14103 355 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 GRM4Q14833 912 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 CEP55Q53EZ4 464 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 PPM1LQ5SGD2 360 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 TWF2Q6IBS0 349 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 FSTL4Q6MZW2 842 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SWSAP1Q6NVH7 229 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MIS18BP1Q6P0N0 1132 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SPATA31D4Q6ZUB0 917 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SMAP1Q8IYB5 467 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 CAMKK1Q8N5S9 505 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 GSTCDQ8NEC7 633 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 FAM167AQ96KS9 214 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 MAGEB10Q96LZ2 347 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 CPPED1Q9BRF8 314 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 LZTS2Q9BRK4 669 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 UBAC1Q9BSL1 405 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 DUSP26Q9BV47 211 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 TRMT61BQ9BVS5 477 aaKnown RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 SLC32A1Q9H598 525 aa4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 C8orf33Q9H7E9 229 aaPredicted RBP4.06□□□□□ -1.76
PDLIM5-218ENST00000513341 BRD9Q9H8M2 597 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms