RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 CDC23Q9UJX2 597 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 COL6A3P12111 3177 aa12.9□□□□□ -0.34
PDPN-210ENST00000513143 A0A1B0GVM2 712 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 TCAF2A6NFQ2 919 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 PGRMC1O00264 195 aaKnown RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 CHADO15335 359 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TBL1XO60907 577 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 CLDN11O75508 207 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 PENKP01210 267 aaPredicted RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 FGGP02679 453 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 CYBBP04839 570 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 ZFXP17010 805 aaPredicted RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 PAFAH1B3Q15102 231 aaKnown RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 FYB2Q5VWT5 728 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 RNF43Q68DV7 783 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 NCBP2-AS2Q69YL0 99 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TRIM68Q6AZZ1 485 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TPGS1Q6ZTW0 290 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 CHST9Q7L1S5 443 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 YAF2Q8IY57 180 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 P2RY11Q96G91 374 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 NAP1L3Q99457 506 aaPredicted RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
PDPN-210ENST00000513143 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 MARK1Q9P0L2 795 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
PDPN-210ENST00000513143 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 APOL1O14791 398 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 NFATC1O95644 943 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ARSAP15289 507 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TGM2P21980 687 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 DYNLT1P63172 113 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 GRM2Q14416 872 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 DHCR24Q15392 516 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 LONRF2Q1L5Z9 754 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TMCO3Q6UWJ1 677 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TFAP2DQ7Z6R9 452 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 UMODL1-AS1Q8N2C9 162 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 LZTR1Q8N653 840 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 RSAD2Q8WXG1 361 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 EBF3Q9H4W6 596 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 KCNK12Q9HB15 430 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 NDFIP2Q9NV92 336 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ARNTLO00327 626 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 PDE2AO00408 941 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 HOXC11O43248 304 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 ADH1CP00326 375 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 APOC2P02655 101 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 CYP17A1P05093 508 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 GDI1P31150 447 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 NR2C2P49116 596 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 SIX1Q15475 284 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 CCDC181Q5TID7 509 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 AFMIDQ63HM1 303 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 SETD3Q86TU7 594 aaPredicted RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 NPWQ8N729 165 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 NOL6Q9H6R4 1146 aaKnown RBP12.88□□□□□ -0.35
PDPN-210ENST00000513143 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 SMARCAL1Q9NZC9 954 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 PRKAG3Q9UGI9 489 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
PDPN-210ENST00000513143 TICRRQ7Z2Z1 1910 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 MIA3Q5JRA6 1907 aa12.87□□□□□ -0.35
PDPN-210ENST00000513143 OTOL1A6NHN0 477 aaPredicted RBP12.87□□□□□ -0.35
PDPN-210ENST00000513143 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms