RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 DCDC5Q6ZRR9 648 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ZNF627Q7L945 461 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ANKRD44Q8N8A2 993 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 FSIP1Q8NA03 581 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ADPRHL1Q8NDY3 354 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 IP6K1Q92551 441 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 NELL1Q92832 810 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 PDLIM2Q96JY6 352 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 LENG8Q96PV6 779 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 CHODLQ9H9P2 273 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ITM2CQ9NQX7 267 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 IL17RBQ9NRM6 502 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ASB6Q9NWX5 421 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 RRN3Q9NYV6 651 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 RAB21Q9UL25 225 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 SLC12A4Q9UP95 1085 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 CNTN6Q9UQ52 1028 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 KNSTRNQ9Y448 316 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 COL4A3Q01955 1670 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 C3orf70A6NLC5 250 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 TMEM232C9JQI7 657 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 EIF3FO00303 357 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 CYR61O00622 381 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 HNRNPRO43390 633 aaKnown RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 JUPP14923 745 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 FPR3P25089 353 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 MCM5P33992 734 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ADD2P35612 726 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 CFHR3Q02985 330 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 DEUP1Q05D60 604 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 MTAPQ13126 283 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 DNASE1L3Q13609 305 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 MFSD13AQ14CX5 517 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ANKRD1Q15327 319 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 GPR162Q16538 588 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 GRHL2Q6ISB3 625 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 CCDC70Q6NSX1 233 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 PIK3AP1Q6ZUJ8 805 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 AMIGO2Q86SJ2 522 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 UEVLDQ8IX04 471 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 CEP70Q8NHQ1 597 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 MAFAQ8NHW3 353 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 SCAMP5Q8TAC9 235 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ADAMTS18Q8TE60 1221 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 THAP4Q8WY91 577 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 WDYHV1Q96HA8 205 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 PIGSQ96S52 555 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 VPS16Q9H269 839 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 SAP30LQ9HAJ7 183 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 FSCN3Q9NQT6 498 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 FOXJ2Q9P0K8 574 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 SLC25A13Q9UJS0 675 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ASAP1Q9ULH1 1129 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 ENTPD2Q9Y5L3 495 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 USP32Q8NFA0 1604 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 BLMP54132 1417 aaPredicted RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 SSH2Q76I76 1423 aa4.7□□□□□ -1.66
HTT-210ENST00000512909 WDR33Q9C0J8 1336 aaKnown RBP4.7□□□□□ -1.66
HTT-210ENST00000512909 A0A1W2PP64 1363 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 BTBD19C9JJ37 291 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 ANP32CO43423 234 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 MT-CO3P00414 261 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 DUSP1P28562 367 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 HOXC9P31274 260 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 GALNSP34059 522 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 CYP4F2P78329 520 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 PSG6Q00889 435 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 CUL4BQ13620 913 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 AAK1Q2M2I8 961 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 MSANTD2Q6P1R3 559 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 ACSM6Q6P461 480 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 TMEM88Q6PEY1 159 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 SYT13Q7L8C5 426 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 PTF1AQ7RTS3 328 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 MOGAT3Q86VF5 341 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 AMER2Q8N7J2 671 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 PNLDC1Q8NA58 520 aaKnown RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 CSGALNACT1Q8TDX6 532 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 AKAP1Q92667 903 aaKnown RBP eCLIP4.69□□□□□ -1.66
HTT-210ENST00000512909 SDCCAG3Q96C92 435 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 ZNF764Q96H86 408 aaPredicted RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 HIC2Q96JB3 615 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 COG8Q96MW5 612 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 RNF26Q9BY78 433 aaPredicted RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 CDCP1Q9H5V8 836 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 RIOX1Q9H6W3 641 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 IPO11Q9UI26 975 aaKnown RBP4.69□□□□□ -1.66
HTT-210ENST00000512909 DAPP1Q9UN19 280 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 SLC8A2Q9UPR5 921 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 CRB1P82279 1406 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 ADGRB2O60241 1585 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 CGNL1Q0VF96 1302 aa4.69□□□□□ -1.66
HTT-210ENST00000512909 MAP3K19Q56UN5 1328 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms