RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ANKRD20A12PQ8NF67 263 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 SNX19Q92543 992 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 IGSF8Q969P0 613 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 TTC17Q96AE7 1141 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 C18orf8Q96DM3 657 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 MYO19Q96H55 970 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 ZNF419Q96HQ0 510 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 RPL10LQ96L21 214 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 MRGPRX3Q96LB0 322 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 TBCBQ99426 244 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 TMPRSS4Q9NRS4 437 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 TMEM63CQ9P1W3 806 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 KIAA1522Q9P206 1035 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 SLC6A14Q9UN76 642 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 ERVW-1Q9UQF0 538 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 SNX10Q9Y5X0 201 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 HS3ST4Q9Y661 456 aa15.29■□□□□ 0.04
UBE2D3-228ENST00000508974 GIPC1O14908 333 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 SIN3BO75182 1162 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 PAGE1O75459 146 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ADCY5O95622 1261 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 DNTTP04053 509 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ASLP04424 464 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 MZF1P28698 734 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ACSL1P33121 698 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 DPP6P42658 865 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ATXN3P54252 364 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 RPS14P62263 151 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 NOMO3P69849 1222 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 UBXN1Q04323 297 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 DEUP1Q05D60 604 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 GFPT1Q06210 699 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 TYRO3Q06418 890 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 AUHQ13825 339 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 PLEKHG6Q3KR16 790 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 C14orf80Q86SX3 495 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ZDHHC17Q8IUH5 632 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ZCCHC9Q8N567 271 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 CEP76Q8TAP6 659 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 GANCQ8TET4 914 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 FOXJ1Q92949 421 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 NPY6RQ99463 290 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 ANLNQ9NQW6 1124 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 METTL5Q9NRN9 209 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 SUN2Q9UH99 717 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 LIMA1Q9UHB6 759 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 SLCO3A1Q9UIG8 710 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 STAP1Q9ULZ2 295 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 SIK3Q9Y2K2 1263 aa15.28■□□□□ 0.04
UBE2D3-228ENST00000508974 A0A1B0GVM2 712 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 TCAF2A6NFQ2 919 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 LGALS16A8MUM7 142 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 KCNK5O95279 499 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 LSM8O95777 96 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ADRB1P08588 477 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SERPINF2P08697 491 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ATP1A3P13637 1013 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ZNF18P17022 549 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 OXTRP30559 389 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 HOXD12P35452 270 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SOX5P35711 763 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 FLT3P36888 993 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 GABRB2P47870 512 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 NOVA1P51513 510 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 JAM2P57087 298 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ECT2LQ008S8 904 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 WDR45BQ5MNZ6 344 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 N4BP2L1Q5TBK1 243 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 ZNF776Q68DI1 518 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SMYD5Q6GMV2 418 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 TRNP1Q6NT89 227 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SND1Q7KZF4 910 aaKnown RBP eCLIP15.27■□□□□ 0.043e-6■□□□□ 8.1
UBE2D3-228ENST00000508974 EMC1Q8N766 993 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 MSANTD4Q8NCY6 345 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 CFAP57Q96MR6 1250 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 NUP58Q9BVL2 599 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 C6orf106Q9H6K1 298 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 WDCPQ9H6R7 721 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 CAPN10Q9HC96 672 aa15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 EIF2B4Q9UI10 523 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-228ENST00000508974 CNOT1A5YKK6 2376 aaKnown RBP15.27■□□□□ 0.03
UBE2D3-228ENST00000508974 TP53BP1Q12888 1972 aaPredicted RBP15.27■□□□□ 0.03
UBE2D3-228ENST00000508974 PLXNA2O75051 1894 aa15.27■□□□□ 0.03
UBE2D3-228ENST00000508974 I6L893 689 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 GJB6O95452 261 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 VAV1P15498 845 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 CHRNB2P17787 502 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 STAT1P42224 750 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 FMO1Q01740 532 aa15.26■□□□□ 0.03
UBE2D3-228ENST00000508974 CDR2Q01850 454 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms