RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 TSPY1Q01534 308 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 DSG1Q02413 1049 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 MED21Q13503 144 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 DBN1Q16643 649 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 RALGPS1Q5JS13 557 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 ASRGL1Q7L266 308 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 GABPB2Q8TAK5 448 aaPredicted RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 PDCD6IPQ8WUM4 868 aaKnown RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 FGD4Q96M96 766 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 TBX10O75333 385 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 EPHA3P29320 983 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 PMLP29590 882 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 NME5P56597 212 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 CTBP1Q13363 440 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 UBR7Q8N806 425 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 ICA1LQ8NDH6 482 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 SLC35F5Q8WV83 523 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 VPS39Q96JC1 886 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 FAM96AQ9H5X1 160 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 IL1RL2Q9HB29 575 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 TCF7L2Q9NQB0 619 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 LTFP02788 710 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 TSHRP16473 764 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 CACNA2D1P54289 1103 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 COG7P83436 770 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 CSHL1Q14406 222 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 ST13P4Q8IZP2 240 aaPredicted RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 CCDC68Q9H2F9 335 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
SMG7-214ENST00000508461 NMRAL1Q9HBL8 299 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 IGKV6-21A0A0C4DH24 114 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 UBA6A0AVT1 1052 aaPredicted RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 DLDP09622 509 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 GRK2P25098 689 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CNTFP26441 200 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 NCBP2-AS2Q69YL0 99 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CHSY1Q86X52 802 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PPHLN1Q8NEY8 458 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SIPA1L1O43166 1804 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 TCRBV5S1A1TA0A578 114 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 E7ESA3 106 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 FAM189A1O60320 539 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 TRIM13O60858 407 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 VAV1P15498 845 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PAMP19021 973 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 ATP6V1C1P21283 382 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CRHR1P34998 444 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 ABCE1P61221 599 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 PDE1CQ14123 709 aaPredicted RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SPATA2LQ8IUW3 424 aaPredicted RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■■ 73.9
SMG7-214ENST00000508461 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 QKIQ96PU8 341 aaKnown RBP eCLIP13.16□□□□□ -0.32e-11■■■■□ 26.3
SMG7-214ENST00000508461 SP110Q9HB58 689 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 IPPQ9Y573 584 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 COL4A5P29400 1685 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PIGNO95427 931 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 ATP6V1B1P15313 513 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PROZP22891 400 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PCSK1P29120 753 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 NEK3P51956 506 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CNGA3Q16281 694 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMG7-214ENST00000508461 SEL1L3Q68CR1 1132 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 KLC3Q6P597 504 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 OTOP3Q7RTS5 596 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 PSTKQ8IV42 348 aaKnown RBP13.16□□□□□ -0.3
SMG7-214ENST00000508461 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 SNX27Q96L92 541 aa13.16□□□□□ -0.3
SMG7-214ENST00000508461 ZNF184Q99676 751 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms