RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 NIPAL4Q0D2K0 466 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 SPDL1Q96EA4 605 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 TMEM209Q96SK2 561 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 SIRPGQ9P1W8 387 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 OR12D3Q9UGF7 316 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 FBXW11Q9UKB1 542 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 F8W810 466 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 GYG2O15488 501 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 TGDSO95455 350 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 POLBP06746 335 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 ESRRAP11474 423 aaPredicted RBP22.57■■□□□ 1.2
SPCS3-203ENST00000507678 MLNP12872 115 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 CD52P31358 61 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 THPOP40225 353 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 STX3Q13277 289 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 BNIPLQ7Z465 357 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 CRLF3Q8IUI8 442 aa22.57■■□□□ 1.2
SPCS3-203ENST00000507678 ENO1P06733 434 aaKnown RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 ALDH18A1P54886 795 aaKnown RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 ZBTB17Q13105 803 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 HSF5Q4G112 596 aaPredicted RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 CERCAMQ5T4B2 595 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 STEAP4Q687X5 459 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 RINLQ6ZS11 566 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 NSL1Q96IY1 281 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 AGAP2Q99490 1192 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 CADM1Q9BY67 442 aaKnown RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 DENND2DQ9H6A0 471 aaPredicted RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 CNGB3Q9NQW8 809 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 SAR1AQ9NR31 198 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 NUDT5Q9UKK9 219 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 FBXO21O94952 628 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 TYK2P29597 1187 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 ERFP50548 548 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 ARL13BQ3SXY8 428 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 TEX44Q53QW1 395 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 MARK2Q7KZI7 788 aaKnown RBP22.56■■□□□ 1.2
SPCS3-203ENST00000507678 SCAMP5Q8TAC9 235 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 GORASP1Q9BQQ3 440 aa22.56■■□□□ 1.2
SPCS3-203ENST00000507678 ITM2AO43736 263 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 ALDH1A2O94788 518 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 CTGFP29279 349 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 OCRLQ01968 901 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 CBLBQ13191 982 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 TRIM42Q8IWZ5 723 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 MFSD3Q96ES6 412 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 CERS2Q96G23 380 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 SMARCD1Q96GM5 515 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 RSRC1Q96IZ7 334 aaKnown RBP22.55■■□□□ 1.2
SPCS3-203ENST00000507678 NUDCD1Q96RS6 583 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 TSPAN18Q96SJ8 248 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 EBF4Q9BQW3 602 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 TMLHEQ9NVH6 421 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 VANGL2Q9ULK5 521 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 HTTP42858 3142 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 KLF11O14901 512 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 LRIG2O94898 1065 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 NFKB1P19838 968 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 RSPH3Q86UC2 560 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 PTCD3Q96EY7 689 aaKnown RBP22.55■■□□□ 1.2
SPCS3-203ENST00000507678 EMCNQ9ULC0 261 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 SHROOM3Q8TF72 1996 aa22.55■■□□□ 1.2
SPCS3-203ENST00000507678 MGEA5O60502 916 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 CCDC22O60826 627 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 JCHAINP01591 159 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 CDC25CP30307 473 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 KDSRQ06136 332 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 PDZD4Q76G19 769 aaPredicted RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 TAC4Q86UU9 113 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 RASAL3Q86YV0 1011 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 TMEM86AQ8N2M4 240 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 MCUR1Q96AQ8 359 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 MTG1Q9BT17 334 aaPredicted RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 CAB39LQ9H9S4 337 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 EBF2Q9HAK2 575 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 EIF2B3Q9NR50 452 aaKnown RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 C15orf41Q9Y2V0 281 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 SAT1P21673 171 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 CD68P34810 354 aaPredicted RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 PGGT1BP53609 377 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 HSP90AA5PQ58FG0 334 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 FAM43BQ6ZT52 329 aaPredicted RBP22.54■■□□□ 1.2
SPCS3-203ENST00000507678 C7orf26Q96N11 449 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 BTBD10Q9BSF8 475 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 ARHGAP39Q9C0H5 1083 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 IGSF9Q9P2J2 1179 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 CDH9Q9ULB4 789 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 HHLA1C9JL84 531 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 DFFAO00273 331 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 HOXC8P31273 242 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 SESN3P58005 492 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 TRIM32Q13049 653 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 UPP1Q16831 310 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 ATP2A3Q93084 1043 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 RTP3Q9BQQ7 232 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 LNPEPQ9UIQ6 1025 aa22.54■■□□□ 1.2
SPCS3-203ENST00000507678 PADI3Q9ULW8 664 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms