RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GDF11O95390 407 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 GH2P01242 217 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 ALDOAP04075 364 aaKnown RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 MIPP30301 263 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 STT3AP46977 705 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 C21orf59P57076 290 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 KCNC4Q03721 635 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 TRAP1Q12931 704 aaKnown RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 MOGQ16653 247 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UGCGQ16739 394 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 DCDC5Q6ZRR9 648 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 LDHDQ86WU2 507 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 RNF157Q96PX1 679 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 MMP19Q99542 508 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 TDRD1Q9BXT4 1180 aaKnown RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 NIF3L1Q9GZT8 377 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 VTI1BQ9UEU0 232 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 TRIM64A6NGJ6 449 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 TRIM64BA6NI03 449 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 TPP1O14773 563 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 ENTPD3O75355 529 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SLURP2P0DP57 97 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SSTR3P32745 418 aaPredicted RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SPP2Q13103 211 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 ART3Q13508 389 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 LMBRD2Q68DH5 695 aaPredicted RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SNX32Q86XE0 403 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 UNC5BQ8IZJ1 945 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 CEP170P1Q96L14 293 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 CSRNP1Q96S65 589 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 TMEM79Q9BSE2 394 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 CAAP1Q9H8G2 361 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 RMI1Q9H9A7 625 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 WDR41Q9HAD4 459 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 OLAHQ9NV23 265 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 FEM1BQ9UK73 627 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 GCATO75600 419 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 APOA4P06727 396 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SURF1Q15526 300 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 TRMT10BQ6PF06 316 aaKnown RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 WDR49Q8IV35 697 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 JOSD2Q8TAC2 188 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 HSPH1Q92598 858 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 OLFM1Q99784 485 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 YIPF2Q9BWQ6 316 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SLC4A5Q9BY07 1137 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 UNKQ9C0B0 810 aaKnown RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 ILKAPQ9H0C8 392 aaPredicted RBP16.25■□□□□ 0.19
SCLT1-208ENST00000506368 XPNPEP3Q9NQH7 507 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 GIN1Q9NXP7 522 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 PKD2L1Q9P0L9 805 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 SLC30A1Q9Y6M5 507 aa16.25■□□□□ 0.19
SCLT1-208ENST00000506368 PTPRJQ12913 1337 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 APOL1O14791 398 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 HDAC3O15379 428 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 KLHL41O60662 606 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 C7P10643 843 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 MAGEA12P43365 314 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CDH6P55285 790 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 RHDQ02161 417 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CEACAM7Q14002 265 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PDK1Q15118 436 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CYP4A22Q5TCH4 519 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PAOXQ6QHF9 649 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 TAS1R3Q7RTX0 852 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CLVS1Q8IUQ0 354 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-208ENST00000506368 EFCAB3Q8N7B9 438 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PDPRQ8NCN5 879 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 C12orf43Q96C57 262 aaKnown RBP16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PLEKHA8Q96JA3 519 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 TCHPQ9BT92 498 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 TMEM39BQ9GZU3 492 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 DRC3Q9H069 523 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 PRDM16Q9HAZ2 1276 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CISHQ9NSE2 258 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 MORF4L1Q9UBU8 362 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 SIP14410 1827 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 ADGRA2Q96PE1 1338 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 CNTNAP2Q9UHC6 1331 aa16.24■□□□□ 0.19
SCLT1-208ENST00000506368 NOP56O00567 594 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 RNASEH2AO75792 299 aaKnown RBP16.23■□□□□ 0.19
SCLT1-208ENST00000506368 ATG7O95352 703 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 NDST2P52849 883 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SEMA5AQ13591 1074 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 SEPT6Q14141 434 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 VWA5B1Q5TIE3 1220 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
SCLT1-208ENST00000506368 MAMDC4Q6UXC1 1216 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms