RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CROCCQ5TZA2 2017 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 ZNF195O14628 629 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 RNASEH2AO75792 299 aaKnown RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 CALCAP01258 141 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 CRHR1P34998 444 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 PCYT1AP49585 367 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 GDF10P55107 478 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 BNIP3Q12983 259 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 TRIM16LQ309B1 348 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 FGD3Q5JSP0 725 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 ODR4Q5SWX8 454 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 FERMT1Q9BQL6 677 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 CDH19Q9H159 772 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 EHD1Q9H4M9 534 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 RIC8BQ9NVN3 520 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 PTBP2Q9UKA9 531 aaKnown RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 KIAA1257Q9ULG3 409 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 ZNF646O15015 1829 aaPredicted RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 GIPC1O14908 333 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 PEX10O60683 326 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 RSL1D1O76021 490 aaKnown RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 GSRP00390 522 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 HSD17B4P51659 736 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 HNRNPFP52597 415 aaKnown RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 KLF10Q13118 480 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 NRF1Q16656 503 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 TRIM72Q6ZMU5 477 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 GRAMD2AQ8IUY3 354 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 BHLHE22Q8NFJ8 381 aaPredicted RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
LETM1-203ENST00000505551 MROQ9BYG7 248 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 CEP44Q9C0F1 390 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 CXorf21Q9HAI6 301 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
LETM1-203ENST00000505551 ANKRD34BA5PLL1 514 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 TOM1L1O75674 476 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 TCF4P15884 667 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 TTKP33981 857 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 NSFP46459 744 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 GPC3P51654 580 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 LSM12Q3MHD2 195 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 C16orf89Q6UX73 402 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 LINC00469Q8N7U9 141 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 PDCD6IPQ8WUM4 868 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 COQ10BQ9H8M1 238 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
LETM1-203ENST00000505551 COQ4Q9Y3A0 265 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 KAT6AQ92794 2004 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 TISP43B9A030 160 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 DCXO43602 365 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 ZBTB14O43829 449 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 SNAP91O60641 907 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 BCAS2O75934 225 aaPredicted RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 ERBB2P04626 1255 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 P4HBP07237 508 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 ITGB5P18084 799 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 NCF2P19878 526 aaPredicted RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 SLC1A6P48664 564 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 MS4A2Q01362 244 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 FASTKD1Q53R41 847 aaKnown RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 FSCBQ5H9T9 825 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 FAM209AQ5JX71 171 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 LIN9Q5TKA1 542 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
LETM1-203ENST00000505551 CADM3Q8N126 398 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 PPM1NQ8N819 430 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 HSD17B14Q9BPX1 270 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 SIAEQ9HAT2 523 aa13.58□□□□□ -0.24
LETM1-203ENST00000505551 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 TNFRSF10AO00220 468 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 PLOD2O00469 737 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 MGEA5O60502 916 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 TCEA1P23193 301 aaKnown RBP13.57□□□□□ -0.24
LETM1-203ENST00000505551 SF3B4Q15427 424 aaKnown RBP eCLIP13.57□□□□□ -0.242e-6■■□□□ 11.7
LETM1-203ENST00000505551 TFDP3Q5H9I0 405 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 LGSNQ5TDP6 509 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 LRRC38Q5VT99 294 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 IGFN1Q86VF2 1251 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 TNIP2Q8NFZ5 429 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
LETM1-203ENST00000505551 NPLQ9BXD5 320 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms