RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ERVW-1Q9UQF0 538 aa14.71□□□□□ -0.05
HOXC9-202ENST00000504557 A0A1B0GVM2 712 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TCAF2A6NFQ2 919 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 MEI4A8MW99 385 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TTC34A8MYJ7 566 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 KHNYNO15037 678 aaKnown RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 MAOBP27338 520 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 MZF1P28698 734 aaPredicted RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 CD6P30203 668 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 STK19P49842 368 aaPredicted RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TPMTP51580 245 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 ZNF33AQ06730 810 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 C15orf59Q2T9L4 293 aaPredicted RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 PLEKHG6Q3KR16 790 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 SLC25A52Q3SY17 297 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 RAB6CQ53S08 254 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TRIM61Q5EBN2 209 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 RNF43Q68DV7 783 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 IL31Q6EBC2 164 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 SMYD5Q6GMV2 418 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TRIM72Q6ZMU5 477 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 FAM131BQ86XD5 332 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 OR2T3Q8NH03 318 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 JOSD2Q8TAC2 188 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 GANCQ8TET4 914 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 TOE1Q96GM8 510 aaKnown RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 LMLNQ96KR4 655 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 AGPAT1Q99943 283 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 FUCA2Q9BTY2 467 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 GPR174Q9BXC1 333 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 RAB6CQ9H0N0 254 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 CBX8Q9HC52 389 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
HOXC9-202ENST00000504557 PRSS16Q9NQE7 514 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 DLL3Q9NYJ7 618 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 ADAM22Q9P0K1 906 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 DAAM1Q9Y4D1 1078 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 SPTBN2O15020 2390 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 DCHS1Q96JQ0 3298 aa14.7□□□□□ -0.06
HOXC9-202ENST00000504557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TMCO5BA8MYB1 307 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SRGAP2O75044 1071 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 CNTN5O94779 1100 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 F9P00740 461 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 ASLP04424 464 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SDHBP21912 280 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 MMP8P22894 467 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 CXCR3P49682 368 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TPM4P67936 248 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 IRX4P78413 519 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 ECT2LQ008S8 904 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 ZNF177Q13360 481 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 CAMK2GQ13555 558 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 IQCB1Q15051 598 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 CLEC16AQ2KHT3 1053 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 STPG1Q5TH74 334 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TTC39BQ5VTQ0 682 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SLC41A1Q8IVJ1 513 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 RXFP2Q8WXD0 754 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SNX19Q92543 992 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TTC17Q96AE7 1141 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 NAP1L5Q96NT1 182 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SELENOOQ9BVL4 669 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 MIR1-1HGQ9H1L0 117 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 SLCO3A1Q9UIG8 710 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
HOXC9-202ENST00000504557 TP53BP1Q12888 1972 aaPredicted RBP14.69□□□□□ -0.06
HOXC9-202ENST00000504557 LNP1A1A4G5 178 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 LRRC53A6NM62 1247 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 I6L893 689 aaPredicted RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 BNIP3LO60238 219 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 FOXD2O60548 495 aaPredicted RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SIN3BO75182 1162 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 DNTTP04053 509 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 UNGP13051 313 aaPredicted RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 FERP16591 822 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 TNFAIP3P21580 790 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SDC4P31431 198 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 RDXP35241 583 aaKnown RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SCNN1AP37088 669 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 MAPK8P45983 427 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 ASIC2Q16515 512 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 UAP1L1Q3KQV9 507 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 ACCSLQ4AC99 568 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 ALFQ53S48 1182 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 TFAP2DQ7Z6R9 452 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SYT12Q8IV01 421 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 OR52K2Q8NGK3 314 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 MRGPRX3Q96LB0 322 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 RTKNQ9BST9 563 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 GTPBP2Q9BX10 602 aaKnown RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 ITM2CQ9NQX7 267 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 ARHGEF38Q9NXL2 777 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 MPP6Q9NZW5 540 aa14.68□□□□□ -0.06
HOXC9-202ENST00000504557 USP36Q9P275 1121 aaKnown RBP14.68□□□□□ -0.06
HOXC9-202ENST00000504557 SUN2Q9UH99 717 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms