RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PFKMP08237 780 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SNRPAP09012 282 aaKnown RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 IQCF3P0C7M6 154 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 ETS1P14921 441 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 PAX3P23760 479 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 MARK3P27448 753 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SDC4P31431 198 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 RPA3P35244 121 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 GCKP35557 465 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 FDFT1P37268 417 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 CCNFP41002 786 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 CLCN3P51790 818 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 NEK3P51956 506 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 NDST1P52848 882 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 CDH6P55285 790 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 CDH8P55286 799 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 BCAR1P56945 870 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SLC8A3P57103 927 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 FASTKD3Q14CZ7 662 aaKnown RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 LLGL1Q15334 1064 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 CCDC14Q49A88 953 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 DUSP28Q4G0W2 176 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 EFHC1Q5JVL4 640 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 ARMC3Q5W041 872 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SLC27A1Q6PCB7 646 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 DARS2Q6PI48 645 aaKnown RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 LVRNQ6Q4G3 990 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 ARMCX2Q7L311 632 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 LRRC6Q86X45 466 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 ANKRD52Q8NB46 1076 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 BEST2Q8NFU1 509 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 MGARPQ8TDB4 240 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 APOPT1Q96IL0 206 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 TWNKQ96RR1 684 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 UBL7Q96S82 380 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 FERMT1Q9BQL6 677 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 FDXACB1Q9BRP7 624 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 KATNBL1Q9H079 304 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 MMADHCQ9H3L0 296 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 C12orf49Q9H741 205 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SMYD3Q9H7B4 428 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 MANSC1Q9H8J5 431 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 ZWILCHQ9H900 591 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 HESX1Q9UBX0 185 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
CASC9-201ENST00000504531 TSPAN16Q9UKR8 245 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 PPM1HQ9ULR3 514 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SORCS3Q9UPU3 1222 aa9.09□□□□□ -0.95
CASC9-201ENST00000504531 SMIM35A0A1B0GVV1 85 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TCRBV9S1A1TA0A576 114 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 IGF2BP3O00425 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
CASC9-201ENST00000504531 KRT38O76015 456 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 ALDH1A2O94788 518 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TMEM63AO94886 807 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 INHBAP08476 426 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 KCNE1P15382 129 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 MAOBP27338 520 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 PTPN4P29074 926 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 BCAT1P54687 386 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 MGAT5Q09328 741 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 KRT81Q14533 505 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SLC1A5Q15758 541 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TBCCQ15814 346 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 ANKRD22Q5VYY1 191 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 ATG16L1Q676U5 607 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 STEAP4Q687X5 459 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SCARA3Q6AZY7 606 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SCARA5Q6ZMJ2 495 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 PRR23CQ6ZRP0 262 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM183BPQ6ZVS7 135 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TBC1D1Q86TI0 1168 aaPredicted RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 MAB21L3Q8N8X9 362 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM71DQ8N9W8 422 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 GDAP1Q8TB36 358 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 UTP4Q969X6 686 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 TTC17Q96AE7 1141 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM46AQ96IP4 442 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 C7orf26Q96N11 449 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 SLC9A7Q96T83 725 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 CALN1Q9BXU9 219 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TRIM55Q9BYV6 548 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 BRD8Q9H0E9 1235 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 ABHD16BQ9H3Z7 469 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM96AQ9H5X1 160 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 PCDH18Q9HCL0 1135 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 DNAJC17Q9NVM6 304 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 KLHL11Q9NVR0 708 aa9.08□□□□□ -0.96
CASC9-201ENST00000504531 GEMIN8Q9NWZ8 242 aaKnown RBP9.08□□□□□ -0.96
CASC9-201ENST00000504531 FAM8A1Q9UBU6 413 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms