RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CXCR3P49682 368 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 BPIFB4P59827 614 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 SHC2P98077 582 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 FMO1Q01740 532 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 CENPCQ03188 943 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 SEMA3BQ13214 749 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 AUHQ13825 339 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 C2CD6Q53TS8 623 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 ZDHHC17Q8IUH5 632 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 CCAR2Q8N163 923 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 ATP6V0D2Q8N8Y2 350 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 OR2I1PQ8NGU4 316 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 SLC20A1Q8WUM9 679 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 TMEM131Q92545 1883 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 PTPRN2Q92932 1015 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 FOXJ1Q92949 421 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 CNTNAP3BQ96NU0 1288 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM129BQ96TA1 746 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 NUSAP1Q9BXS6 441 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 CNTNAP3Q9BZ76 1288 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 VPS16Q9H269 839 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 C6orf106Q9H6K1 298 aaPredicted RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM204AQ9H8W3 233 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 DNAAF2Q9NVR5 837 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 ZNF212Q9UDV6 495 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 SERGEFQ9UGK8 458 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 LIMA1Q9UHB6 759 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 SLCO3A1Q9UIG8 710 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 ERVW-1Q9UQF0 538 aa14.45□□□□□ -0.1
PDLIM7-211ENST00000504318 CABIN1Q9Y6J0 2220 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 FRYQ5TBA9 3013 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 A0A1B0GVM2 712 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 TCAF2A6NFQ2 919 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 TTC34A8MYJ7 566 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 F5H5T6 163 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 ARHGAP33O14559 1287 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 ZBTB24O43167 697 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 SIN3BO75182 1162 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 ADCY5O95622 1261 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 SRPRAP08240 638 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 OXTRP30559 389 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 VASPP50552 380 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 ZBTB16Q05516 673 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 CDH18Q13634 790 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 KLHL40Q2TBA0 621 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 SH3PXD2AQ5TCZ1 1133 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 DCAF12L1Q5VU92 463 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 TAF3Q5VWG9 929 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 PSAPL1Q6NUJ1 521 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 RABEPKQ7Z6M1 372 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 TMEM35BQ8NCS4 154 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 FRS2Q8WU20 508 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 NOX5Q96PH1 765 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 NUP58Q9BVL2 599 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 PCED1AQ9H1Q7 454 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 TMPRSS4Q9NRS4 437 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 KIAA1522Q9P206 1035 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 WDFY3Q8IZQ1 3526 aa14.44□□□□□ -0.1
PDLIM7-211ENST00000504318 DOCK9Q9BZ29 2069 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 SYNJ2BP-COX16A0A087WUM0 186 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM170AA1A519 330 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 M0QYT0 321 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 NDUFS2O75306 463 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 PAGE1O75459 146 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 CFIP05156 583 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 SLC2A3P11169 496 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 CD59P13987 128 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 MAPK8P45983 427 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 STK19P49842 368 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 NOVA1P51513 510 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 COPB1P53618 953 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 ARID5AQ03989 594 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 RAB6CQ53S08 254 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 TTC39BQ5VTQ0 682 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 ARCQ7LC44 396 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 C18orf8Q96DM3 657 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 TBCBQ99426 244 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 RAB6CQ9H0N0 254 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 PABPC3Q9H361 631 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 RRN3Q9NYV6 651 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 COX16Q9P0S2 106 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 SUN2Q9UH99 717 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 TBC1D30Q9Y2I9 924 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 SNX10Q9Y5X0 201 aa14.43□□□□□ -0.1
PDLIM7-211ENST00000504318 CEP295Q9C0D2 2601 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 USP24Q9UPU5 2620 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 IGLV3-10A0A075B6K4 115 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 TYW5A2RUC4 315 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 LGALS16A8MUM7 142 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 H0Y626 953 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 CNTN5O94779 1100 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 GFPT2O94808 682 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms