RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	CYBA	P13498	195 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	GM2A	P17900	193 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ZBTB16	Q05516	673 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	SPANXN3	Q5MJ09	141 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CD300LG	Q6UXG3	332 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CCDC91	Q7Z6B0	441 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	TMEM135	Q86UB9	458 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	SCML4	Q8N228	414 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CERS2	Q96G23	380 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	PKMYT1	Q99640	499 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ACBD6	Q9BR61	282 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	WDCP	Q9H6R7	721 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CASS4	Q9NQ75	786 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	RPS6KL1	Q9Y6S9	549 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	FCHO1	O14526	889 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	MTSS1	O43312	755 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	MGEA5	O60502	916 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	PEX11A	O75192	247 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	LRIG2	O94898	1065 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CYP11A1	P05108	521 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	PRKCG	P05129	697 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	MX2	P20592	715 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	GARS	P41250	739 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ZBTB17	Q13105	803 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	FRG1	Q14331	258 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	TLDC1	Q6P9B6	456 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CES3	Q6UWW8	571 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	AGAP3	Q96P47	875 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	PGLYRP2	Q96PD5	576 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	BTBD10	Q9BSF8	475 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	TACO1	Q9BSH4	297 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	MLPH	Q9BV36	600 aa	Predicted RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	CADM1	Q9BY67	442 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	NMUR2	Q9GZQ4	415 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	TKTL2	Q9H0I9	626 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	UPF3A	Q9H1J1	476 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	GBA3	Q9H227	469 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	LRRC40	Q9H9A6	602 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	NOP53	Q9NZM5	478 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	IL1RAPL1	Q9NZN1	696 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	OR12D3	Q9UGF7	316 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	TRHDE	Q9UKU6	1024 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	SNX10	Q9Y5X0	201 aa		13.36	□□□□□ -0.27
MATR3-233	ENST00000504203	ERI2	A8K979	691 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	PLIN3	O60664	434 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	USP12	O75317	370 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	PGK1	P00558	417 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ERVK-10	P10266	1014 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ODC1	P11926	461 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	CALB2	P22676	271 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	GP5	P40197	560 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	STX3	Q13277	289 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	INSC	Q1MX18	579 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	FASTKD1	Q53R41	847 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	WASHC2D	Q5SRD0	308 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	MBLAC2	Q68D91	279 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	C16orf46	Q6P387	395 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	TAC4	Q86UU9	113 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ALYREF	Q86V81	257 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	RASSF3	Q86WH2	238 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	CRLF3	Q8IUI8	442 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ISL2	Q96A47	359 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	EPAS1	Q99814	870 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	TMLHE	Q9NVH6	421 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	THAP1	Q9NVV9	213 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ZFAT	Q9P243	1243 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	DCDC2	Q9UHG0	476 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	C15orf41	Q9Y2V0	281 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	HBS1L	Q9Y450	684 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ZCWPW2	A0A1B0GU75	182 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	CAPN14	A8MX76	684 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	FGF3	P11487	239 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	BDNF	P23560	247 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	MAGEA12	P43365	314 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	NKX3-2	P78367	333 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	DCLRE1A	Q6PJP8	1040 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	ZCCHC23	Q6ZST2	131 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	SMC1B	Q8NDV3	1235 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	VAT1	Q99536	393 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	CPNE1	Q99829	537 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	RNPEPL1	Q9HAU8	725 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	BFAR	Q9NZS9	450 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	VANGL2	Q9ULK5	521 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203	PADI3	Q9ULW8	664 aa		13.35	□□□□□ -0.27
MATR3-233	ENST00000504203		M0QZQ0	153 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	GSC2	O15499	205 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	USP1	O94782	785 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	IGLV3-25	P01717	112 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	SERPINB6	P35237	376 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	BRCC3	P46736	316 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	CCNG1	P51959	295 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	DSC3	Q14574	896 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	PCLAF	Q15004	111 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	TEDDM1	Q5T9Z0	273 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	GRTP1	Q5TC63	336 aa		13.34	□□□□□ -0.27
MATR3-233	ENST00000504203	BEND5	Q7L4P6	421 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms