RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 WFDC5Q8TCV5 224 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 GANCQ8TET4 914 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 LMLNQ96KR4 655 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 ZDHHC5Q9C0B5 715 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 BTBD1Q9H0C5 482 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 PCED1AQ9H1Q7 454 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SIX2Q9NPC8 291 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 SAMSN1Q9NSI8 373 aaKnown RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
MED28-203ENST00000503945 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 ERVW-1Q9UQF0 538 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 PLXNB3Q9ULL4 1909 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 WDFY3Q8IZQ1 3526 aa12.36□□□□□ -0.43
MED28-203ENST00000503945 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 TARSL2A2RTX5 802 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 FAM221BA6H8Z2 402 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 IGLV3-25P01717 112 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 CAPNS1P04632 268 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 EEF1GP26641 437 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 NOS2P35228 1153 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 RNASE9P60153 205 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 RPS14P62263 151 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 SULT2A1Q06520 285 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 NME3Q13232 169 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 ZNF177Q13360 481 aaPredicted RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 HNRNPDQ14103 355 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 PITRM1Q5JRX3 1037 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 MIIPQ5JXC2 388 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.43
MED28-203ENST00000503945 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 CACUL1Q86Y37 369 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 C1orf131Q8NDD1 294 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 MYEOVQ96EZ4 313 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 PRICKLE1Q96MT3 831 aaPredicted RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 SLC2A13Q96QE2 648 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 WDCPQ9H6R7 721 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 SGK2Q9HBY8 427 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 LMBRD1Q9NUN5 540 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 EIF2B4Q9UI10 523 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 INTS6Q9UL03 887 aaKnown RBP12.35□□□□□ -0.43
MED28-203ENST00000503945 PCDHB9Q9Y5E1 797 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 ATRXP46100 2492 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
MED28-203ENST00000503945 ZFYVE26Q68DK2 2539 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 M0QYT0 321 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 SH3BP5O60239 455 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 F9P00740 461 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 ERBB2P04626 1255 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 C7P10643 843 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 CYP11B1P15538 503 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 ACSL1P33121 698 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 MATKP42679 507 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 PITX1P78337 314 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 AUHQ13825 339 aaKnown RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 HNRNPA1L2Q32P51 320 aaKnown RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 ZNF776Q68DI1 518 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 FBXL22Q6P050 247 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 IL27RAQ6UWB1 636 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 MMS22LQ6ZRQ5 1243 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 SNX19Q92543 992 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 GBP4Q96PP9 640 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 RSPH9Q9H1X1 276 aaPredicted RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 DNAAF2Q9NVR5 837 aaKnown RBP12.34□□□□□ -0.43
MED28-203ENST00000503945 FBXL12Q9NXK8 326 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.34□□□□□ -0.43
MED28-203ENST00000503945 SLCO3A1Q9UIG8 710 aa12.34□□□□□ -0.43
MED28-203ENST00000503945 PTPRBP23467 1997 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 EDDM13A0A1B0GTR0 161 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 GOLGA6L22H0YM25 854 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 SIN3BO75182 1162 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 GJB3O75712 270 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 TRIM16O95361 564 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 SEMA4FO95754 770 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 PNMA6AP0CW24 399 aaPredicted RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 UCHL3P15374 230 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 AFF3P51826 1226 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 PLK1P53350 603 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 TEAD4Q15561 434 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 TRIP6Q15654 476 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 C9orf64Q5T6V5 341 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms