RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 HAPLN3Q96S86 360 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 TIPINQ9BVW5 301 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 ISCUQ9H1K1 167 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 CCDC134Q9H6E4 229 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 CNOT10Q9H9A5 744 aaKnown RBP4.69□□□□□ -1.66
MATR3-202ENST00000502422 GPRC5CQ9NQ84 441 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 GKN1Q9NS71 199 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 TUBGCP4Q9UGJ1 667 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 LNPEPQ9UIQ6 1025 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 RWDD2AQ9UIY3 292 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 GGT7Q9UJ14 662 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 TMEM59LQ9UK28 342 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 YIPF1Q9Y548 306 aa4.69□□□□□ -1.66
MATR3-202ENST00000502422 SMG1Q96Q15 3661 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 SETXQ7Z333 2677 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 PCNX2A6NKB5 2137 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 ABCA7Q8IZY2 2146 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SPAARA0A1B0GVQ0 90 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 E9PAM4 449 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 TRDMT1O14717 391 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 DNAJC6O75061 913 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 ZNF189O75820 626 aaPredicted RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 GFPT2O94808 682 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 LCA5LO95447 670 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 EGFP01133 1207 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 MMEP08473 750 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 PLEKP08567 350 aaPredicted RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 FAM200BP0CF97 657 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CCNB1P14635 433 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CHN1P15882 459 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 FUT4P22083 530 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 DNAJA1P31689 397 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 RPL9P32969 192 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 CTNNA1P35221 906 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 AVPR1AP37288 418 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 MMP13P45452 471 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 KLK7P49862 253 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 RAD23BP54727 409 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SPAG1Q07617 926 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 BFSP1Q12934 665 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 LSAMPQ13449 338 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 MRPL58Q14197 206 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 DMC1Q14565 340 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 NTRK3Q16288 839 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CNPY1Q3B7I2 92 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 ZC2HC1CQ53FD0 456 aaPredicted RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 PMS2CLQ68D20 193 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 PIK3AP1Q6ZUJ8 805 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SYT13Q7L8C5 426 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 PRICKLE2Q7Z3G6 844 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 DNAJB7Q7Z6W7 309 aaPredicted RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 USP37Q86T82 979 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 ITIH5Q86UX2 942 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 TTC30AQ86WT1 665 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CCNJLQ8IV13 435 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CHCHD4Q8N4Q1 142 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SMYD1Q8NB12 490 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 TSTD1Q8NFU3 115 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.68□□□□□ -1.66
MATR3-202ENST00000502422 HAS1Q92839 578 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 ACDQ96AP0 544 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 WBP1Q96G27 269 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 IFT74Q96LB3 600 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 GSDMAQ96QA5 445 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 KRT12Q99456 494 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 TCHPQ9BT92 498 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 PI4K2AQ9BTU6 479 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 TPSD1Q9BZJ3 242 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 EBF3Q9H4W6 596 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 CCDC86Q9H6F5 360 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 EBF1Q9UH73 591 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 STK38LQ9Y2H1 464 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 USP20Q9Y2K6 914 aa4.68□□□□□ -1.66
MATR3-202ENST00000502422 SRPRBQ9Y5M8 271 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 GCN1Q92616 2671 aaKnown RBP4.68□□□□□ -1.66
MATR3-202ENST00000502422 BPTFQ12830 3046 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 ZNF638Q14966 1978 aaKnown RBP4.67□□□□□ -1.66
MATR3-202ENST00000502422 F8VZ95 297 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 K7ERI5 159 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 PJA2O43164 708 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 HIP1RO75146 1068 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 LYPLA2O95372 231 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 GJB6O95452 261 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 GSTA2P09210 222 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 DESP17661 470 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 PAFAH1B1P43034 410 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 AFMP43652 599 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 GALK1P51570 392 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 PHEXP78562 749 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 ATP11AP98196 1134 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 SOX4Q06945 474 aaPredicted RBP4.67□□□□□ -1.66
MATR3-202ENST00000502422 MCL1Q07820 350 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 SCAPQ12770 1279 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 VEPH1Q14D04 833 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 ZRSR2Q15696 482 aaKnown RBP4.67□□□□□ -1.66
MATR3-202ENST00000502422 CFAP221Q4G0U5 840 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 ATF7IP2Q5U623 682 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 EEF1DP3Q658K8 133 aa4.67□□□□□ -1.66
MATR3-202ENST00000502422 FSTL4Q6MZW2 842 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms