RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CCDC47Q96A33 483 aaKnown RBP15.24■□□□□ 0.03
TRAF4-212ENST00000498540 SERAC1Q96JX3 654 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 FCRL3Q96P31 734 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-212ENST00000498540 IRX2Q9BZI1 471 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-212ENST00000498540 NRSN2Q9GZP1 204 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 ERVW-1Q9UQF0 538 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 DOCK9Q9BZ29 2069 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 YKT6O15498 198 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 STX10O60499 249 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 LTFP02788 710 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 EPB41P11171 864 aaKnown RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 VDRP11473 427 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 CDK4P11802 303 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 SYKP43405 635 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 ARRB1P49407 418 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 NDUFA8P51970 172 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 CDH18Q13634 790 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 DCAF17Q5H9S7 520 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 SFMBT2Q5VUG0 894 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 TCERG1LQ5VWI1 586 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 PMF1Q6P1K2 205 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 KANSL1Q7Z3B3 1105 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 CFAP52Q8N1V2 620 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 KDM1BQ8NB78 822 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 SNIP1Q8TAD8 396 aaKnown RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 FCRL2Q96LA5 508 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 NUCKS1Q9H1E3 243 aaKnown RBP15.23■□□□□ 0.03
TRAF4-212ENST00000498540 SLCO3A1Q9UIG8 710 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 COQ4Q9Y3A0 265 aa15.23■□□□□ 0.03
TRAF4-212ENST00000498540 ITIH6Q6UXX5 1313 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 EDDM13A0A1B0GTR0 161 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 TARSL2A2RTX5 802 aaKnown RBP15.22■□□□□ 0.03
TRAF4-212ENST00000498540 TLR4O00206 839 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 RRP8O43159 456 aaKnown RBP15.22■□□□□ 0.03
TRAF4-212ENST00000498540 MS4A13Q5J8X5 152 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 LCLAT1Q6UWP7 414 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRAF4-212ENST00000498540 SPATS2Q86XZ4 545 aaKnown RBP15.22■□□□□ 0.03
TRAF4-212ENST00000498540 STK40Q8N2I9 435 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 SLC35F5Q8WV83 523 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 IRGQQ8WZA9 623 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 AZIN2Q96A70 460 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 COL26A1Q96A83 441 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
TRAF4-212ENST00000498540 FAM237AA0A1B0GTK4 181 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 TYW5A2RUC4 315 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 CETN3O15182 167 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 LATO43561 262 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 BRINP1O60477 761 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 ADH1BP00325 375 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 CALCAP01258 141 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 FYNP06241 537 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 SRPRAP08240 638 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 VAV1P15498 845 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 GOT1P17174 413 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 MZF1P28698 734 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 DRD3P35462 400 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 RXRGP48443 463 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 NUMBP49757 651 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 STK19P49842 368 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 METAP1P53582 386 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 YWHAEP62258 255 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 LRMPQ12912 555 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 DCAF6Q58WW2 860 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 APCDD1Q8J025 514 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 DQX1Q8TE96 717 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 BAP1Q92560 729 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 SNX21Q969T3 373 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 RPL10LQ96L21 214 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 XPO7Q9UIA9 1087 aaKnown RBP15.21■□□□□ 0.03
TRAF4-212ENST00000498540 CEP83Q9Y592 693 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 ZNF462Q96JM2 2506 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 TENM4Q6N022 2769 aa15.21■□□□□ 0.03
TRAF4-212ENST00000498540 MGAQ8IWI9 3026 aa15.21■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 M0QYV0 167 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 MOCS2O96007 188 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-212ENST00000498540 IL1BP01584 269 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 PLA2G2AP14555 144 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 CKMT2P17540 419 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 C5AR1P21730 350 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 ECT2LQ008S8 904 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 SLC45A4Q5BKX6 768 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 NAPEPLDQ6IQ20 393 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TMEM270Q6UE05 265 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
TRAF4-212ENST00000498540 TBC1D3Q8IZP1 549 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms