RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TPMTP51580 245 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 IRAK1P51617 712 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 LIMK1P53667 647 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 ST8SIA6P61647 398 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 BRMS1LQ5PSV4 323 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 PHLDB2Q86SQ0 1253 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 C14orf80Q86SX3 495 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 SLC41A1Q8IVJ1 513 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 APCDD1Q8J025 514 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 TOE1Q96GM8 510 aaKnown RBP18.98■□□□□ 0.63
HOXD11-202ENST00000498438 MRGPRX3Q96LB0 322 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 HSPA12BQ96MM6 686 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 CFAP57Q96MR6 1250 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 EDEM2Q9BV94 578 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 TKTL2Q9H0I9 626 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 SIK2Q9H0K1 926 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 WDCPQ9H6R7 721 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 RTN4Q9NQC3 1192 aaKnown RBP18.98■□□□□ 0.63
HOXD11-202ENST00000498438 PRSS16Q9NQE7 514 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 ANLNQ9NQW6 1124 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 ITM2CQ9NQX7 267 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 TMEM74BQ9NUR3 256 aa18.98■□□□□ 0.63
HOXD11-202ENST00000498438 CNOT1A5YKK6 2376 aaKnown RBP18.98■□□□□ 0.63
HOXD11-202ENST00000498438 NYNRINQ9P2P1 1898 aaKnown RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 DCDC2BA2VCK2 349 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 I6L893 689 aaPredicted RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 KHNYNO15037 678 aaKnown RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 F9P00740 461 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 ACADMP11310 421 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 UNGP13051 313 aaPredicted RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 PDGFRAP16234 1089 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 NSFP46459 744 aaKnown RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 NUMBP49757 651 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 ZNF33AQ06730 810 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 IQCB1Q15051 598 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 CLEC16AQ2KHT3 1053 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 CXorf57Q6NSI4 855 aaKnown RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 ARCQ7LC44 396 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 EMC1Q8N766 993 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 MTG2Q9H4K7 406 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 FBRSQ9HAH7 460 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 SEPT11Q9NVA2 429 aaKnown RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 WSB2Q9NYS7 404 aaPredicted RBP18.97■□□□□ 0.63
HOXD11-202ENST00000498438 SUN2Q9UH99 717 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 PILRBQ9UKJ0 227 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 ERVW-1Q9UQF0 538 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 PAXBP1Q9Y5B6 917 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 NUMA1Q14980 2115 aa18.97■□□□□ 0.63
HOXD11-202ENST00000498438 NCOR2Q9Y618 2525 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 MZF1P28698 734 aaPredicted RBP18.96■□□□□ 0.63
HOXD11-202ENST00000498438 RDXP35241 583 aaKnown RBP18.96■□□□□ 0.63
HOXD11-202ENST00000498438 DPP6P42658 865 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 ECT2LQ008S8 904 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 TRIM61Q5EBN2 209 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 STPG1Q5TH74 334 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 PEAR1Q5VY43 1037 aaPredicted RBP18.96■□□□□ 0.63
HOXD11-202ENST00000498438 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 TMPRSS4Q9NRS4 437 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 EVLQ9UI08 416 aaPredicted RBP18.96■□□□□ 0.63
HOXD11-202ENST00000498438 SNX10Q9Y5X0 201 aa18.96■□□□□ 0.63
HOXD11-202ENST00000498438 GJB6O95452 261 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 IGLV3-19P01714 112 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 SRPRAP08240 638 aaKnown RBP18.95■□□□□ 0.62
HOXD11-202ENST00000498438 FERP16591 822 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 OXTRP30559 389 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 HOXD12P35452 270 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 IRX4P78413 519 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 ATP11AP98196 1134 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 FOXK2Q01167 660 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 PTP4A2Q12974 167 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 SLC12A1Q13621 1099 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 HNRNPA1L2Q32P51 320 aaKnown RBP18.95■□□□□ 0.62
HOXD11-202ENST00000498438 C5orf22Q49AR2 442 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 FILIP1LQ4L180 1135 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 RNF219Q5W0B1 726 aaPredicted RBP18.95■□□□□ 0.62
HOXD11-202ENST00000498438 IL31Q6EBC2 164 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 KDM1BQ8NB78 822 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 ZNF419Q96HQ0 510 aaPredicted RBP18.95■□□□□ 0.62
HOXD11-202ENST00000498438 AGPAT1Q99943 283 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 GPR174Q9BXC1 333 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 TMEM51Q9NW97 253 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 ADAM22Q9P0K1 906 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
HOXD11-202ENST00000498438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 A0A1B0GTH6 734 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 TTC34A8MYJ7 566 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 SIN3BO75182 1162 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 CLDN11O75508 207 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 C7P10643 843 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 STK19P49842 368 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 CDH4P55283 916 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 OXCT1P55809 520 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 GSCP56915 257 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 RPS14P62263 151 aaKnown RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 ZNF177Q13360 481 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 ARID5BQ14865 1188 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 CDO1Q16878 200 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 ZNF776Q68DI1 518 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 FAM124AQ86V42 546 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 FAM131BQ86XD5 332 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms