RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 APCDD1Q8J025 514 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 OLIG1Q8TAK6 271 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 FAM172AQ8WUF8 416 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 ZC3H10Q96K80 434 aaKnown RBP17.22■□□□□ 0.35
ABCF3-218ENST00000498136 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 MRGPRX1Q96LB2 322 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
ABCF3-218ENST00000498136 DUSP15Q9H1R2 295 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-218ENST00000498136 ARRDC1-AS1Q9H2J1 176 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 INTS6Q9UL03 887 aaKnown RBP17.22■□□□□ 0.35
ABCF3-218ENST00000498136 CAPN11Q9UMQ6 739 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 CYP8B1Q9UNU6 501 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■□□□□ 10.8
ABCF3-218ENST00000498136 FAM186AA6NE01 2351 aa17.22■□□□□ 0.35
ABCF3-218ENST00000498136 PLXND1Q9Y4D7 1925 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 E9PAM4 449 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 I6L893 689 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-218ENST00000498136 ATMINO43313 823 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-218ENST00000498136 ZNF217O75362 1048 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 CLDN11O75508 207 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 ENDOD1O94919 500 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 ACADMP11310 421 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 CDH4P55283 916 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 SLC12A1Q13621 1099 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 PTPRNQ16849 979 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 PLEKHG6Q3KR16 790 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 RAB6CQ53S08 254 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 BNIPLQ7Z465 357 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 VPS36Q86VN1 386 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 DNAAF5Q86Y56 855 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
ABCF3-218ENST00000498136 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 TTC17Q96AE7 1141 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 LOXL4Q96JB6 756 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 C1orf74Q96LT6 269 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 HAPLN3Q96S86 360 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 TMEM245Q9H330 911 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 CD248Q9HCU0 757 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 SUN2Q9UH99 717 aa17.21■□□□□ 0.35
ABCF3-218ENST00000498136 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
ABCF3-218ENST00000498136 RIF1Q5UIP0 2472 aaKnown RBP17.21■□□□□ 0.34
ABCF3-218ENST00000498136 ABCA7Q8IZY2 2146 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 CEP192Q8TEP8 1941 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 RTN2O75298 545 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 EPN2O95208 641 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 GYPCP04921 128 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 MZF1P28698 734 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 CASP14P31944 242 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 CTSOP43234 321 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 DHPSP49366 369 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 RPL7AP62424 266 aaKnown RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 PMS2CLQ68D20 193 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 SCYL2Q6P3W7 929 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 TFAP2DQ7Z6R9 452 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 PRCCQ92733 491 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 SIPA1Q96FS4 1042 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 PPP1R9BQ96SB3 815 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 MKRN2Q9H000 416 aaKnown RBP17.2■□□□□ 0.34
ABCF3-218ENST00000498136 MUC3BQ9H195 1237 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 PARVAQ9NVD7 372 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 MPP6Q9NZW5 540 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 ERVW-1Q9UQF0 538 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 SDK1Q7Z5N4 2213 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
ABCF3-218ENST00000498136 FRYLO94915 3013 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 OTOGLQ3ZCN5 2332 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CCP110O43303 1012 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CNTN5O94779 1100 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 SERPING1P05155 500 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 RHOCP08134 193 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 GZMAP12544 262 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 NNMTP40261 264 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 ZNF143P52747 638 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 COPAP53621 1224 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 HDAC4P56524 1084 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 RPL6Q02878 288 aaKnown RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CREB5Q02930 508 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CCDC6Q16204 474 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 ALFQ53S48 1182 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CXorf57Q6NSI4 855 aaKnown RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 ARMCX6Q7L4S7 300 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 TMEFF1Q8IYR6 380 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 CENPIQ92674 756 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 SYN2Q92777 582 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 ZNF653Q96CK0 615 aa17.19■□□□□ 0.34
ABCF3-218ENST00000498136 RPL10LQ96L21 214 aaKnown RBP17.19■□□□□ 0.34
ABCF3-218ENST00000498136 MYO1AQ9UBC5 1043 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms