RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR1E1P30953 314 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 CETN2P41208 172 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 CDKN2BP42772 138 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 NUMBP49757 651 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 PEX5P50542 639 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 CDH4P55283 916 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 PFKPQ01813 784 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 ANKRD20A8PQ5CZ79 823 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 TFDP3Q5H9I0 405 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 TMCO3Q6UWJ1 677 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 NYAP1Q6ZVC0 841 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 C12orf40Q86WS4 652 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 ADGRG2Q8IZP9 1017 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 GJD3Q8N144 294 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 RTL3Q8N8U3 475 aaKnown RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 FAM71BQ8TC56 605 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 WFDC5Q8TCV5 224 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 TSC1Q92574 1164 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 HEBP1Q9NRV9 189 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 DNAJC17Q9NVM6 304 aaKnown RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 MFHAS1Q9Y4C4 1052 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 PIAS3Q9Y6X2 628 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-227ENST00000498056 APOL1O14791 398 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 MFSD11O43934 449 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CLDN11O75508 207 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 PYGMP11217 842 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 KRT10P13645 584 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CASQ1P31415 396 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 GJA4P35212 333 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 MAPKAPK2P49137 400 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 DGKGP49619 791 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF177Q13360 481 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-227ENST00000498056 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 C5orf22Q49AR2 442 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 MPP7Q5T2T1 576 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 NAIF1Q69YI7 327 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-227ENST00000498056 NCBP2-AS2Q69YL0 99 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 ANKS1BQ7Z6G8 1248 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 NLRP14Q86W24 1093 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 NPWQ8N729 165 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 PCDH19Q8TAB3 1148 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF592Q92610 1267 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
CPNE1-227ENST00000498056 MAK16Q9BXY0 300 aaKnown RBP13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CARD9Q9H257 536 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 MUTYHQ9UIF7 546 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CA14Q9ULX7 337 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 CLEC4EQ9ULY5 219 aa13.95□□□□□ -0.18
CPNE1-227ENST00000498056 DRGXA6NNA5 263 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 SPECC1L-ADORA2AF8WAN1 911 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 DCLK1O15075 740 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 TULP3O75386 442 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 CTHP32929 405 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 SERPINB6P35237 376 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 COPS2P61201 443 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 GAB4Q2WGN9 574 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 ARTNQ5T4W7 220 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 C6orf118Q5T5N4 469 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 TPRG1Q6ZUI0 275 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 VSIG1Q86XK7 387 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF557Q8N988 423 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-227ENST00000498056 NETO2Q8NC67 525 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 HAUS1Q96CS2 278 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 RNF157Q96PX1 679 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 HEMGNQ9BXL5 484 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 MUC3BQ9H195 1237 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 SLC2A4RGQ9NR83 387 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 ABCB8Q9NUT2 735 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 NDFIP2Q9NV92 336 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 ETNK2Q9NVF9 386 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 SNX12Q9UMY4 172 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 F5P12259 2224 aa13.94□□□□□ -0.18
CPNE1-227ENST00000498056 CKAP5Q14008 2032 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 ZNF487B1APH4 448 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 KIF2AO00139 706 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 FANCGO15287 622 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CEP104O60308 925 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CST8O60676 142 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 RAMP2O60895 175 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 MAP3K6O95382 1288 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 OPRD1P41143 372 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 CSKP41240 450 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 HCAR3P49019 387 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 LMAN2Q12907 356 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 TFDP2Q14188 446 aa13.93□□□□□ -0.18
CPNE1-227ENST00000498056 MLF2Q15773 248 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-227ENST00000498056 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms