RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SCNM1Q9BWG6 230 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 PABPC3Q9H361 631 aaKnown RBP3.23□□□□□ -1.89
RIF1-212ENST00000498041 ELAC1Q9H777 363 aaKnown RBP3.23□□□□□ -1.89
RIF1-212ENST00000498041 MLXIPQ9HAP2 919 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 MOV10Q9HCE1 1003 aaKnown RBP3.23□□□□□ -1.89
RIF1-212ENST00000498041 PRDM8Q9NQV8 689 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 TMEM45AQ9NWC5 275 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 ELOVL5Q9NYP7 299 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 DAPP1Q9UN19 280 aa3.23□□□□□ -1.89
RIF1-212ENST00000498041 C19orf53Q9UNZ5 99 aaPredicted RBP3.23□□□□□ -1.89
RIF1-212ENST00000498041 KIAA0556O60303 1618 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ATP10BO94823 1461 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ZNF521Q96K83 1311 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 IQGAP2Q13576 1575 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 hCG_1642624A0A1W2PR95 340 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 MBD3L5A6NJ08 208 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 F8W810 466 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 PRPF4O43172 522 aaKnown RBP eCLIP3.22□□□□□ -1.89
RIF1-212ENST00000498041 PEX14O75381 377 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ALDOCP09972 364 aaKnown RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 TMEM191BP0C7N4 346 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 CYP19A1P11511 503 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 PEPDP12955 493 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 PNLIPRP1P54315 467 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 FAM3BP58499 235 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 SHC2P98077 582 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 RPS6KA2Q15349 733 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 RBMS2Q15434 407 aaKnown RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 TTC22Q5TAA0 569 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 TANGO2Q6ICL3 276 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 SULT6B1Q6IMI4 303 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 LIN54Q6MZP7 749 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ZNF793Q6ZN11 406 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.22□□□□□ -1.89
RIF1-212ENST00000498041 ADGRF3Q8IZF5 1079 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ARL14EPQ8N8R7 260 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 OR52N4Q8NGI2 321 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 STT3BQ8TCJ2 826 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 OTUD7AQ8TE49 926 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 WIPF2Q8TF74 440 aaPredicted RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 SCARB1Q8WTV0 552 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 IGFBPL1Q8WX77 278 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 CPT1BQ92523 772 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ZFYVE19Q96K21 471 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ZNF347Q96SE7 839 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 TUBB6Q9BUF5 446 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 TMEM120AQ9BXJ8 343 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 MAGEH1Q9H213 219 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 PAPOLBQ9NRJ5 636 aaKnown RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 COPG1Q9Y678 874 aaKnown RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 SYNJ2O15056 1496 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
RIF1-212ENST00000498041 LRRC9Q6ZRR7 1453 aa3.22□□□□□ -1.89
RIF1-212ENST00000498041 ZNF335Q9H4Z2 1342 aaPredicted RBP3.21□□□□□ -1.89
RIF1-212ENST00000498041 CFAP43Q8NDM7 1665 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 NUP160Q12769 1436 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 SOCS2O14508 198 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 UGDHO60701 494 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 PRF1P14222 555 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 CHKAP35790 457 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 PCP4P48539 62 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 RCAN1P53805 252 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 SRSF1Q07955 248 aaKnown RBP eCLIP3.21□□□□□ -1.9
RIF1-212ENST00000498041 LAMB3Q13751 1172 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 FAM83BQ5T0W9 1011 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 PAQR4Q8N4S7 273 aaPredicted RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 MPLKIPQ8TAP9 179 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 CLEC4CQ8WTT0 213 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 C3orf49Q96BT1 292 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 HMCESQ96FZ2 354 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 FCRL4Q96PJ5 515 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 TRAPPC9Q96Q05 1148 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 NPAS1Q99742 590 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 PIMREGQ9BSJ6 248 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 PAGR1Q9BTK6 254 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 TRMOQ9BU70 441 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 DDX23Q9BUQ8 820 aaKnown RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 SORBS1Q9BX66 1292 aaKnown RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 OSBPL5Q9H0X9 879 aaPredicted RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.21□□□□□ -1.9
RIF1-212ENST00000498041 NDUFAF4Q9P032 175 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 HEY2Q9UBP5 337 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 GRHPRQ9UBQ7 328 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 BAG5Q9UL15 447 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 SLC8A2Q9UPR5 921 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 AFG3L2Q9Y4W6 797 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 PCDHA10Q9Y5I2 948 aa3.21□□□□□ -1.9
RIF1-212ENST00000498041 CFAP65Q6ZU64 1925 aaKnown RBP3.21□□□□□ -1.9
RIF1-212ENST00000498041 CACNA1IQ9P0X4 2223 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 CASKIN1Q8WXD9 1431 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 EPRSP07814 1512 aaKnown RBP3.2□□□□□ -1.9
RIF1-212ENST00000498041 KIAA0586Q9BVV6 1533 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 UGGT2Q9NYU1 1516 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 TRBV5-3A0A0A0MS03 114 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 DPPA5A6NC42 116 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 HMX3A6NHT5 357 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 AGAP5A6NIR3 686 aa3.2□□□□□ -1.9
RIF1-212ENST00000498041 SERPINA4P29622 427 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms