RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 HLA-BQ31612 363 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 HNRNPA1L2Q32P51 320 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 GJB7Q6PEY0 223 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 DHX40Q8IX18 779 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 MLKLQ8NB16 471 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 GATA6Q92908 595 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 BIRC7Q96CA5 298 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 MYEOVQ96EZ4 313 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 FAM204AQ9H8W3 233 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 TM7SF3Q9NS93 570 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 FBXL12Q9NXK8 326 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 XPO7Q9UIA9 1087 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ZMIZ1Q9ULJ6 1067 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ERVW-1Q9UQF0 538 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 EDDM13A0A1B0GTR0 161 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 BECN2A8MW95 431 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 KCNU1A8MYU2 1149 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 HSF2BPO75031 334 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 SIN3BO75182 1162 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 IGLV3-25P01717 112 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 CD27P26842 260 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 CCR1P32246 355 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 KRT9P35527 623 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 GRIA4P48058 902 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 OXCT1P55809 520 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC12A1Q13621 1099 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 TTC39BQ5VTQ0 682 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 KIAA0895LQ68EN5 471 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 ADAT2Q7Z6V5 191 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 CHCHD4Q8N4Q1 142 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 SHC3Q92529 594 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 MYO19Q96H55 970 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 PPP1R13BQ96KQ4 1090 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 MRGPRX3Q96LB0 322 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 OMDQ99983 421 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 MTG2Q9H4K7 406 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 SYNCQ9H7C4 482 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 TM9SF3Q9HD45 589 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 DDIT4Q9NX09 232 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 KLK13Q9UKR3 277 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 PCDHGC3Q9UN70 934 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 PCDHGB2Q9Y5G2 931 aa12.15□□□□□ -0.46
NUDCD3-211ENST00000497978 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 SYNJ2BP-COX16A0A087WUM0 186 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 LRRC72A6NJI9 287 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 TTC34A8MYJ7 566 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 FLRT2O43155 660 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 PON1P27169 355 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 CTSOP43234 321 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 BNC1Q01954 994 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 SULT2A1Q06520 285 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 CST6Q15828 149 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 C9orf64Q5T6V5 341 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 OR6B2Q6IFH4 312 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 GLRX5Q86SX6 157 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 MMAAQ8IVH4 418 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 DEFB106AQ8N104 65 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 RHBDD1Q8TEB9 315 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 ZCCHC14Q8WYQ9 949 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 SLC2A13Q96QE2 648 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 CPXM1Q96SM3 734 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 CDC6Q99741 560 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 COX16Q9P0S2 106 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 DNAJC12Q9UKB3 198 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 ANKRD6Q9Y2G4 727 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
NUDCD3-211ENST00000497978 ITIH6Q6UXX5 1313 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 A0A1B0GVM2 712 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 A0A1W2PP55 124 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 TCAF2A6NFQ2 919 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 MID1O15344 667 aa12.13□□□□□ -0.47
NUDCD3-211ENST00000497978 DFNA5O60443 496 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms