RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SULT1E1P49888 294 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 OXCT1P55809 520 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 ZBED6P86452 979 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 ZNF33AQ06730 810 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 CAMK2GQ13555 558 aaPredicted RBP15.83■□□□□ 0.12
NUP50-219ENST00000497960 PTPRNQ16849 979 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 TDRD12Q587J7 1177 aaKnown RBP15.83■□□□□ 0.12
NUP50-219ENST00000497960 TRIM72Q6ZMU5 477 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 DRC7Q8IY82 874 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 DEFB119Q8N690 84 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 SLC20A1Q8WUM9 679 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 LMLNQ96KR4 655 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 RPRD1AQ96P16 312 aaPredicted RBP15.83■□□□□ 0.12
NUP50-219ENST00000497960 NPY6RQ99463 290 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 PRMT1Q99873 361 aaKnown RBP15.83■□□□□ 0.12
NUP50-219ENST00000497960 EDEM2Q9BV94 578 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 WDCPQ9H6R7 721 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 GRPEL1Q9HAV7 217 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 ITM2CQ9NQX7 267 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 RXFP3Q9NSD7 469 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 SEPT11Q9NVA2 429 aaKnown RBP15.83■□□□□ 0.12
NUP50-219ENST00000497960 PLXND1Q9Y4D7 1925 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 CACNA1AO00555 2505 aa15.83■□□□□ 0.12
NUP50-219ENST00000497960 DCDC2BA2VCK2 349 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 ADCY5O95622 1261 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 CYP1A1P04798 512 aaPredicted RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 ITPKAP23677 461 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 HOXD12P35452 270 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 COPAP53621 1224 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 DEUP1Q05D60 604 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 AUHQ13825 339 aaKnown RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 SLC25A52Q3SY17 297 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 C2CD6Q53TS8 623 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 FSCBQ5H9T9 825 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 PITRM1Q5JRX3 1037 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 BRMS1LQ5PSV4 323 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 STPG1Q5TH74 334 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 FBXL22Q6P050 247 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 MMS22LQ6ZRQ5 1243 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 ZNF366Q8N895 744 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 FOXJ1Q92949 421 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 PPP1R9BQ96SB3 815 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 NUSAP1Q9BXS6 441 aaKnown RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 USP36Q9P275 1121 aaKnown RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 EVLQ9UI08 416 aaPredicted RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 INTS6Q9UL03 887 aaKnown RBP15.82■□□□□ 0.12
NUP50-219ENST00000497960 DMXL1Q9Y485 3027 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 CKAP5Q14008 2032 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 PI4KAP42356 2102 aa15.82■□□□□ 0.12
NUP50-219ENST00000497960 A0A1B0GVM2 712 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 TCAF2A6NFQ2 919 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 MFAP3LO75121 409 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PAGE1O75459 146 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CXCR3P49682 368 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 TPMTP51580 245 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 FMO1Q01740 532 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 SLC12A1Q13621 1099 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PLEKHG6Q3KR16 790 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 TRIM61Q5EBN2 209 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 SYCP2LQ5T4T6 812 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 RNF219Q5W0B1 726 aaPredicted RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 E4F1Q66K89 784 aaPredicted RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 RABEPKQ7Z6M1 372 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CACUL1Q86Y37 369 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CCAR2Q8N163 923 aaKnown RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 KDM1BQ8NB78 822 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CEP76Q8TAP6 659 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 NT5C3BQ969T7 300 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PGAP3Q96FM1 320 aaPredicted RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 TOE1Q96GM8 510 aaKnown RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 ZNF419Q96HQ0 510 aaPredicted RBP15.81■□□□□ 0.12
NUP50-219ENST00000497960 HSPA12BQ96MM6 686 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 TBCBQ99426 244 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 TKTL2Q9H0I9 626 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 SIK2Q9H0K1 926 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 CD93Q9NPY3 652 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PRSS16Q9NQE7 514 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PIGVQ9NUD9 493 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 PILRBQ9UKJ0 227 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 VANGL2Q9ULK5 521 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 HS3ST4Q9Y661 456 aa15.81■□□□□ 0.12
NUP50-219ENST00000497960 ATXN2Q99700 1313 aaKnown RBP15.8■□□□□ 0.12
NUP50-219ENST00000497960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.8■□□□□ 0.12
NUP50-219ENST00000497960 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 GOLGA6L6A8MZA4 724 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 PATE3B3GLJ2 98 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 SRPRAP08240 638 aaKnown RBP15.8■□□□□ 0.12
NUP50-219ENST00000497960 CHRNB2P17787 502 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 MMP8P22894 467 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 CDC25BP30305 580 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 FLT3P36888 993 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 NNMTP40261 264 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 NSFP46459 744 aaKnown RBP15.8■□□□□ 0.12
NUP50-219ENST00000497960 IRX4P78413 519 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 ECT2LQ008S8 904 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 SULT2A1Q06520 285 aa15.8■□□□□ 0.12
NUP50-219ENST00000497960 ZNF177Q13360 481 aaPredicted RBP15.8■□□□□ 0.12
NUP50-219ENST00000497960 DUOXA1Q1HG43 343 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms