RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 ANKRD40Q6AI12 368 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 TMEM270Q6UE05 265 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 CFAP52Q8N1V2 620 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 DDX50Q9BQ39 737 aaKnown RBP22.54■■□□□ 1.2
CLIC4-204ENST00000497755 AASDHPPTQ9NRN7 309 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 KALRNO60229 2985 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 MYLKQ15746 1914 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 SLC16A3O15427 465 aaKnown RBP22.53■■□□□ 1.2
CLIC4-204ENST00000497755 SRPRAP08240 638 aaKnown RBP22.53■■□□□ 1.2
CLIC4-204ENST00000497755 C1SP09871 688 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 PMS1P54277 932 aaKnown RBP22.53■■□□□ 1.2
CLIC4-204ENST00000497755 MS4A13Q5J8X5 152 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 AADATQ8N5Z0 425 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 EID2Q8N6I1 236 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 TSC1Q92574 1164 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 SLC35C1Q96A29 364 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 SLC39A13Q96H72 371 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 HSFY1Q96LI6 401 aa22.53■■□□□ 1.2
CLIC4-204ENST00000497755 NUCKS1Q9H1E3 243 aaKnown RBP22.53■■□□□ 1.2
CLIC4-204ENST00000497755 FLNBO75369 2602 aaKnown RBP22.53■■□□□ 1.2
CLIC4-204ENST00000497755 RFPL3O75679 317 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 CALCAP01258 141 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 CDK4P11802 303 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 GOT1P17174 413 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 ITPKBP27987 946 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 ABCG1P45844 678 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 FKBP3Q00688 224 aaKnown RBP22.52■■□□□ 1.2
CLIC4-204ENST00000497755 TARDBPQ13148 414 aaKnown RBP eCLIP22.52■■□□□ 1.26e-9■■■■■ 29.8
CLIC4-204ENST00000497755 DCAF6Q58WW2 860 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 PIP4K2CQ8TBX8 421 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 DQX1Q8TE96 717 aaKnown RBP22.52■■□□□ 1.2
CLIC4-204ENST00000497755 NXPE2Q96DL1 559 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 MIS12Q9H081 205 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 GDF3Q9NR23 364 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 TLR6Q9Y2C9 796 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 PCDHB4Q9Y5E5 795 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 ITIH6Q6UXX5 1313 aa22.52■■□□□ 1.2
CLIC4-204ENST00000497755 DOCK9Q9BZ29 2069 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 EDDM13A0A1B0GTR0 161 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 TYW5A2RUC4 315 aaKnown RBP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 TLR4O00206 839 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 FBXO21O94952 628 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 LUC7L3O95232 432 aaKnown RBP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 HNF1BP35680 557 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 EIF2S3P41091 472 aaKnown RBP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 ACADVLP49748 655 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 ECT2LQ008S8 904 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 BNIP3Q12983 259 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 PNOCQ13519 176 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 CDH18Q13634 790 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 C6orf118Q5T5N4 469 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 SND1Q7KZF4 910 aaKnown RBP eCLIP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 APCDD1Q8J025 514 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 STK40Q8N2I9 435 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 OR14C36Q8NHC7 312 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 PTPRN2Q92932 1015 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 SERAC1Q96JX3 654 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 ARMCX3Q9UH62 379 aaPredicted RBP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 XPO7Q9UIA9 1087 aaKnown RBP22.51■■□□□ 1.19
CLIC4-204ENST00000497755 NAALADL1Q9UQQ1 740 aa22.51■■□□□ 1.19
CLIC4-204ENST00000497755 M0QYV0 167 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 YKT6O15498 198 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 TLX3O43711 291 aaPredicted RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 C5AR1P21730 350 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 BRD2P25440 801 aaKnown RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 EPHA8P29322 1005 aaPredicted RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 RXRGP48443 463 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 PSMD8P48556 350 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 ADPRHP54922 357 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 NXPH1P58417 271 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 COBLL1Q53SF7 1204 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 FBXL19Q6PCT2 694 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 CCDC117Q8IWD4 279 aaPredicted RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 ADAM32Q8TC27 787 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 KAT5Q92993 513 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 RPL10LQ96L21 214 aaKnown RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 SERPINB11Q96P15 392 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 UBL7Q96S82 380 aaPredicted RBP22.5■■□□□ 1.19
CLIC4-204ENST00000497755 TSG101Q99816 390 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 ERVMER34-1Q9H9K5 563 aa22.5■■□□□ 1.19
CLIC4-204ENST00000497755 LATO43561 262 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 MOCS3O95396 460 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 FMO5P49326 533 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 ARRB1P49407 418 aaPredicted RBP22.49■■□□□ 1.19
CLIC4-204ENST00000497755 SEMG2Q02383 582 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 NNTQ13423 1086 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 STILQ15468 1287 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 ZNF658Q5TYW1 1059 aaPredicted RBP22.49■■□□□ 1.19
CLIC4-204ENST00000497755 PRORYQ9H606 182 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 AK5Q9Y6K8 562 aa22.49■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3DA0A087WVF3 549 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3IA0A087WXS9 549 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3EA0A087X179 549 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3KA0A087X1G2 549 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3FA6NER0 549 aaPredicted RBP22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3LB9A6J9 549 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 MOCS2O96007 188 aaPredicted RBP22.48■■□□□ 1.19
CLIC4-204ENST00000497755 ADH1BP00325 375 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 PRB1P04280 392 aa22.48■■□□□ 1.19
CLIC4-204ENST00000497755 TBC1D3HP0C7X1 549 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms