RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CPNE7Q9UBL6 633 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 GRHPRQ9UBQ7 328 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 GMEB2Q9UKD1 530 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PCDHB7Q9Y5E2 793 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PCDHA3Q9Y5H8 950 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 SNX13Q9Y5W8 968 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MIA3Q5JRA6 1907 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 ACACAQ13085 2346 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PTPRQQ9UMZ3 2332 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 IGKV6-21A0A0C4DH24 114 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 A0A0U1RQF3 1178 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 FITM1A5D6W6 292 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SMCO2A6NFE2 343 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 FAM171A2A8MVW0 826 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 NT5C1B-RDH14C9J2C7 533 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 PYCARD-AS1I3L0S3 204 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 FOXN3O00409 490 aaPredicted RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS52-222ENST00000495981 MSH4O15457 936 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 GSC2O15499 205 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 IL18RAPO95256 599 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 TDP2O95551 362 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CXCL14O95715 111 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 IL18BPO95998 194 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CTSAP10619 480 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 KITP10721 976 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 HSD3B1P14060 373 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 PLA2G2AP14555 144 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CPA1P15085 419 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 PNLIPP16233 465 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CTSSP25774 331 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 APEX1P27695 318 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 STAT5AP42229 794 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 METAP2P50579 478 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS52-222ENST00000495981 NLRP11P59045 1033 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 IL13RA1P78552 427 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CDC42EP1Q00587 391 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SMC1AQ14683 1233 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 CNGA2Q16280 664 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 KHDC1Q4VXA5 237 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 CCDC38Q502W7 563 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SPOUT1Q5T280 376 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 THEMIS2Q5TEJ8 643 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 STPG1Q5TH74 334 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 LAIR1Q6GTX8 287 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 PAQR3Q6TCH7 311 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SPPL2CQ8IUH8 684 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 RHOT1Q8IXI2 618 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 FBXL16Q8N461 479 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 C3orf20Q8ND61 904 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 ETNPPLQ8TBG4 499 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 IFI44Q8TCB0 444 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 CALML6Q8TD86 181 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 TNPO1Q92973 898 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 SECISBP2LQ93073 1101 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 C18orf8Q96DM3 657 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 TOE1Q96GM8 510 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 ZNF668Q96K58 619 aaPredicted RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 CLPTM1LQ96KA5 538 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 YTHDC1Q96MU7 727 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 MBOAT7Q96N66 472 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 MAP7D2Q96T17 732 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 C7orf25Q9BPX7 421 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 ZNF577Q9BSK1 485 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 BTBD2Q9BX70 525 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 MRPL9Q9BYD2 267 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 SFXN1Q9H9B4 322 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 GJB4Q9NTQ9 266 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 LMBRD1Q9NUN5 540 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 AGPAT5Q9NUQ2 364 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 TBC1D13Q9NVG8 400 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SPG21Q9NZD8 308 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 IGSF9Q9P2J2 1179 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 WRAP73Q9P2S5 460 aaPredicted RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 EPS15L1Q9UBC2 864 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 DNAJB4Q9UDY4 337 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 IRAK3Q9Y616 596 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 SCINQ9Y6U3 715 aa4.66□□□□□ -1.66
VPS52-222ENST00000495981 PDCD11Q14690 1871 aaKnown RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 KIF26AQ9ULI4 1882 aaPredicted RBP4.66□□□□□ -1.66
VPS52-222ENST00000495981 A0A1B0GVC2 190 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 A0A1W2PQJ5 194 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 KANSL1LA0AUZ9 987 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 ISM1B1AKI9 464 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 ANHXE9PGG2 379 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 F8W810 466 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 H3BUI4 141 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 INPPL1O15357 1258 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 MAGEB2O15479 319 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 CHMP2AO43633 222 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 HYAL3O43820 417 aaPredicted RBP4.65□□□□□ -1.67
VPS52-222ENST00000495981 SLC37A4O43826 429 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 CUTAO60888 179 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 ZC3H11AO75152 810 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS52-222ENST00000495981 CSDE1O75534 798 aaKnown RBP4.65□□□□□ -1.67
VPS52-222ENST00000495981 PSMD10O75832 226 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 RHOBTB3O94955 611 aa4.65□□□□□ -1.67
VPS52-222ENST00000495981 CSTBP04080 98 aaKnown RBP4.65□□□□□ -1.67
VPS52-222ENST00000495981 AMY1AP04745 511 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms