RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PYROXD2Q8N2H3 581 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
HDAC6-235ENST00000495515 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.61■□□□□ 0.41
HDAC6-235ENST00000495515 TPCN2Q8NHX9 752 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 KCNV2Q8TDN2 545 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 HSPH1Q92598 858 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 CLDN23Q96B33 292 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 IER2Q9BTL4 223 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.61■□□□□ 0.41
HDAC6-235ENST00000495515 ABCB8Q9NUT2 735 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 GPATCH2LQ9NWQ4 482 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 MPP6Q9NZW5 540 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 GGA2Q9UJY4 613 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 CLEC4EQ9ULY5 219 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 HCN4Q9Y3Q4 1203 aa17.61■□□□□ 0.41
HDAC6-235ENST00000495515 MTF2Q9Y483 593 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-235ENST00000495515 TECTAO75443 2155 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 FAM72CH0Y354 149 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 H3BRJ5 948 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 TRIM24O15164 1050 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 CNTN5O94779 1100 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 COMTP21964 271 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 HLA-FP30511 346 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 OR1E1P30953 314 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 MAPKAPK2P49137 400 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 SEMA3BQ13214 749 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 KRT81Q14533 505 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 DPYSL2Q16555 572 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 SMTNL2Q2TAL5 461 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 ALFQ53S48 1182 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 FAM72AQ5TYM5 149 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 LRRC38Q5VT99 294 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 FAM72DQ6L9T8 149 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 CYP4V2Q6ZWL3 525 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-235ENST00000495515 FAM72BQ86X60 149 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 CIR1Q86X95 450 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-235ENST00000495515 RHOT1Q8IXI2 618 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 SYCE1Q8N0S2 351 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 TBC1D30Q9Y2I9 924 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 ALG6Q9Y672 507 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 DUSP10Q9Y6W6 482 aa17.6■□□□□ 0.41
HDAC6-235ENST00000495515 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 K7EQS6 105 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 ATG13O75143 517 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 ATP5BP06576 529 aaKnown RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 RHOCP08134 193 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 TCF4P15884 667 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 HOXC13P31276 330 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 GJC1P36383 396 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 HCAR3P49019 387 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 MRPS21P82921 87 aaKnown RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 LMAN2Q12907 356 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 PDK2Q15119 407 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 CA9Q16790 459 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 HSF5Q4G112 596 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 ZNF783Q6ZMS7 281 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 ZNF662Q6ZS27 426 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 TRMT11Q7Z4G4 463 aaKnown RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 TFAP2DQ7Z6R9 452 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 KCTD6Q8NC69 237 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 KIAA1524Q8TCG1 905 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 MAGEB5Q9BZ81 275 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 TMEM248Q9NWD8 314 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 RCOR3Q9P2K3 495 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 SALL4Q9UJQ4 1053 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
HDAC6-235ENST00000495515 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
HDAC6-235ENST00000495515 NPC1O15118 1278 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 RNF40O75150 1001 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 DCNP07585 359 aaKnown RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 POLR2EP19388 210 aaKnown RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 CD70P32970 193 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 ETFBP38117 255 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 IRAK1P51617 712 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 CDH6P55285 790 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 TAS2R40P59535 323 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 MESP2Q0VG99 397 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 FZD5Q13467 585 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 GEN1Q17RS7 908 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 FSCBQ5H9T9 825 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 TXNRD3NBQ6F5E7 133 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 RFX8Q6ZV50 586 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 KIAA0907Q7Z7F0 614 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 RTL3Q8N8U3 475 aaKnown RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 WFDC5Q8TCV5 224 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 ACDQ96AP0 544 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 CIPCQ9C0C6 399 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 MUC3BQ9H195 1237 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 CHRDQ9H2X0 955 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 RBM12Q9NTZ6 932 aaKnown RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 ELOVL2Q9NXB9 296 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 DDX56Q9NY93 547 aaKnown RBP17.58■□□□□ 0.4
HDAC6-235ENST00000495515 GUCA1BQ9UMX6 200 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 PLA2G4CQ9UP65 541 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 PPP2R2CQ9Y2T4 447 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 COL4A3Q01955 1670 aa17.58■□□□□ 0.4
HDAC6-235ENST00000495515 ILVBLA1L0T0 632 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms