RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CTSOP43234 321 aaPredicted RBP34.27■■■■□ 3.08
CBX4-203ENST00000494546 CXCR3P49682 368 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 NUMBP49757 651 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 PLEKHG6Q3KR16 790 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 SLC25A52Q3SY17 297 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 DHX40Q8IX18 779 aaKnown RBP34.27■■■■□ 3.08
CBX4-203ENST00000494546 MYO19Q96H55 970 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 BPIFA3Q9BQP9 254 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 GPR174Q9BXC1 333 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 NUSAP1Q9BXS6 441 aaKnown RBP34.27■■■■□ 3.08
CBX4-203ENST00000494546 ERVW-1Q9UQF0 538 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 TNRC6BQ9UPQ9 1833 aaKnown RBP34.27■■■■□ 3.08
CBX4-203ENST00000494546 CFIP05156 583 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 PDGFRAP16234 1089 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 OXTRP30559 389 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 BRMS1LQ5PSV4 323 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 TRIM72Q6ZMU5 477 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 RGL4Q8IZJ4 473 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 SLC30A5Q8TAD4 765 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 PGAP3Q96FM1 320 aaPredicted RBP34.26■■■■□ 3.08
CBX4-203ENST00000494546 ZNF419Q96HQ0 510 aaPredicted RBP34.26■■■■□ 3.08
CBX4-203ENST00000494546 MRGPRX3Q96LB0 322 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 FBRSQ9HAH7 460 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 METTL5Q9NRN9 209 aaKnown RBP34.26■■■■□ 3.08
CBX4-203ENST00000494546 ARHGEF38Q9NXL2 777 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 TMEM59LQ9UK28 342 aa34.26■■■■□ 3.08
CBX4-203ENST00000494546 C4orf47A7E2U8 309 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 SMTNL1A8MU46 457 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 F9P00740 461 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 HOXD12P35452 270 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 IRAK1P51617 712 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 PEAR1Q5VY43 1037 aaPredicted RBP34.25■■■■□ 3.07
CBX4-203ENST00000494546 RNF219Q5W0B1 726 aaPredicted RBP34.25■■■■□ 3.07
CBX4-203ENST00000494546 PHLDB2Q86SQ0 1253 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 C14orf80Q86SX3 495 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 FAM124AQ86V42 546 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 FOXJ1Q92949 421 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 C11orf70Q9BRQ4 267 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 ANLNQ9NQW6 1124 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 PAXBP1Q9Y5B6 917 aa34.25■■■■□ 3.07
CBX4-203ENST00000494546 CEP192Q8TEP8 1941 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 KCNA4P22459 653 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 MMP8P22894 467 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 ECT2LQ008S8 904 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 DUOXA1Q1HG43 343 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 SYCP2LQ5T4T6 812 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 TRNP1Q6NT89 227 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 CFAP57Q96MR6 1250 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 PCDHB18PQ96TA0 734 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 NUP58Q9BVL2 599 aa34.24■■■■□ 3.07
CBX4-203ENST00000494546 IGLV3-19P01714 112 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 SRPRAP08240 638 aaKnown RBP34.23■■■■□ 3.07
CBX4-203ENST00000494546 MZF1P28698 734 aaPredicted RBP34.23■■■■□ 3.07
CBX4-203ENST00000494546 ZNF165P49910 485 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 RPS14P62263 151 aaKnown RBP34.23■■■■□ 3.07
CBX4-203ENST00000494546 SLC12A1Q13621 1099 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 HNRNPA1L2Q32P51 320 aaKnown RBP34.23■■■■□ 3.07
CBX4-203ENST00000494546 PPM1JQ5JR12 505 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 SLC23A3Q6PIS1 610 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 EMC1Q8N766 993 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 CEP76Q8TAP6 659 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 TMEM9BQ9NQ34 198 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 SEPT11Q9NVA2 429 aaKnown RBP34.23■■■■□ 3.07
CBX4-203ENST00000494546 SNX10Q9Y5X0 201 aa34.23■■■■□ 3.07
CBX4-203ENST00000494546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP34.22■■■■□ 3.07
CBX4-203ENST00000494546 MEI4A8MW99 385 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 TTC34A8MYJ7 566 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 TEX33O43247 280 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 OXCT1P55809 520 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 ZNF177Q13360 481 aaPredicted RBP34.22■■■■□ 3.07
CBX4-203ENST00000494546 CXorf57Q6NSI4 855 aaKnown RBP34.22■■■■□ 3.07
CBX4-203ENST00000494546 KDM1BQ8NB78 822 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 RPL10LQ96L21 214 aaKnown RBP34.22■■■■□ 3.07
CBX4-203ENST00000494546 SLCO3A1Q9UIG8 710 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 CACNA1AO00555 2505 aa34.22■■■■□ 3.07
CBX4-203ENST00000494546 GON4LQ3T8J9 2241 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 I6L893 689 aaPredicted RBP34.21■■■■□ 3.07
CBX4-203ENST00000494546 SIN3BO75182 1162 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 DNTTP04053 509 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 UNGP13051 313 aaPredicted RBP34.21■■■■□ 3.07
CBX4-203ENST00000494546 MAOBP27338 520 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 WDR45BQ5MNZ6 344 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 ZNF776Q68DI1 518 aaPredicted RBP34.21■■■■□ 3.07
CBX4-203ENST00000494546 RABEPKQ7Z6M1 372 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 FSCN3Q9NQT6 498 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 TMPRSS4Q9NRS4 437 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 TMEM51Q9NW97 253 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 SLC6A14Q9UN76 642 aa34.21■■■■□ 3.07
CBX4-203ENST00000494546 TM4SF5O14894 197 aa34.2■■■■□ 3.07
CBX4-203ENST00000494546 ENGP17813 658 aa34.2■■■■□ 3.07
CBX4-203ENST00000494546 RDXP35241 583 aaKnown RBP34.2■■■■□ 3.07
CBX4-203ENST00000494546 MAPK8P45983 427 aa34.2■■■■□ 3.07
CBX4-203ENST00000494546 NSFP46459 744 aaKnown RBP34.2■■■■□ 3.07
CBX4-203ENST00000494546 STK19P49842 368 aaPredicted RBP34.2■■■■□ 3.07
CBX4-203ENST00000494546 ATP11AP98196 1134 aa34.2■■■■□ 3.07
CBX4-203ENST00000494546 ARCQ7LC44 396 aa34.2■■■■□ 3.07
CBX4-203ENST00000494546 RTN4Q9NQC3 1192 aaKnown RBP34.2■■■■□ 3.07
CBX4-203ENST00000494546 CDX4O14627 284 aaPredicted RBP34.19■■■■□ 3.06
CBX4-203ENST00000494546 CLDN11O75508 207 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 CDH4P55283 916 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms