RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 UBN1Q9NPG3 1134 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 XPNPEP1Q9NQW7 623 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 ARHGEF3Q9NR81 526 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 DLGAP2Q9P1A6 1054 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 SAE1Q9UBE0 346 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 STK39Q9UEW8 545 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 Q9UFV3 132 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 DPP7Q9UHL4 492 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 NCANO14594 1321 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CNTNAP2Q9UHC6 1331 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 FRYLO94915 3013 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 DMXL1Q9Y485 3027 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CACNA1GO43497 2377 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ANHXE9PGG2 379 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 DDX3XO00571 662 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 PRRG2O14669 202 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 FFAR3O14843 346 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CCL16O15467 120 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ADAM12O43184 909 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 NRP2O60462 931 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 DEXIO95424 95 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 MYL1P05976 194 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ADCY8P40145 1251 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ETV4P43268 484 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ADKP55263 362 aaKnown RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CSTF1Q05048 431 aaKnown RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 HTR4Q13639 388 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 SPIDRQ14159 915 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 MXD4Q14582 209 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 UBXN2BQ14CS0 331 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 EIF4HQ15056 248 aaKnown RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 SLC44A4Q53GD3 710 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 FAM171A1Q5VUB5 890 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 FUT10Q6P4F1 479 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 MOXD1Q6UVY6 613 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CYP26C1Q6V0L0 522 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 RUFY3Q7L099 469 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 MAEAQ7L5Y9 396 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 NEK8Q86SG6 692 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 REXO1L1PQ8IX06 675 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 C4orf19Q8IY42 314 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 MAML2Q8IZL2 1156 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CARFQ8N187 725 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 LINC01356Q8N9X3 169 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CNNM3Q8NE01 707 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 OR14C36Q8NHC7 312 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ITFG1Q8TB96 612 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 HDAC7Q8WUI4 952 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 TCP11Q8WWU5 503 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 RUBCNQ92622 972 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 FAM20AQ96MK3 541 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 SLC2A13Q96QE2 648 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 TAAR9Q96RI9 348 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 CLSTN3Q9BQT9 956 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 TRIM6Q9C030 488 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-219ENST00000494323 HAPLN2Q9GZV7 340 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 TMEM168Q9H0V1 697 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 PLEKHA4Q9H4M7 779 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 POLD4Q9HCU8 107 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 KCNMB3Q9NPA1 279 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 FNIP2Q9P278 1114 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 PRSS50Q9UI38 385 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 ADAM28Q9UKQ2 775 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 COL4A3Q01955 1670 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 TRIP11Q15643 1979 aa5.66□□□□□ -1.5
PTCD3-219ENST00000494323 EPG5Q9HCE0 2579 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 NOTCH4Q99466 2003 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ACACBO00763 2458 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 A0A1B0GUA9 196 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 KANSL1LA0AUZ9 987 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 CASTOR2A6NHX0 329 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 C9orf118A6NHY6 69 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 DKC1O60832 514 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 NDUFS2O75306 463 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 CYP1A1P04798 512 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 XPAP23025 273 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 GLRA2P23416 452 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 AXLP30530 894 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 OR1D2P34982 312 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ARL2P36404 184 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 SLC5A3P53794 718 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 LGALS4P56470 323 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 STARD6P59095 220 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 MBTD1Q05BQ5 628 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 TOP3AQ13472 1001 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 CAPSQ13938 189 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 TFDP1Q14186 410 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 FAM26FQ5R3K3 315 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PPM1LQ5SGD2 360 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PPP4R3AQ6IN85 833 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 GALNT17Q6IS24 598 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 TSSK4Q6SA08 328 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 SUMF1Q8NBK3 374 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PJA1Q8NG27 643 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms