RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TMEM8BA6NDV4 472 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 GJB3O75712 270 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SEMA4FO95754 770 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 PROS1P07225 676 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SRPRAP08240 638 aaKnown RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 CD59P13987 128 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 TACR2P21452 398 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 CCR1P32246 355 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 CSKP41240 450 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 AFF3P51826 1226 aaKnown RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 BPIFB4P59827 614 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 RPS14P62263 151 aaKnown RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SLC12A1Q13621 1099 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 TRIP6Q15654 476 aaKnown RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 ZNF423Q2M1K9 1284 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 VWA3BQ502W6 1294 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 PITRM1Q5JRX3 1037 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 RABGAP1LQ5R372 815 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 ARTNQ5T4W7 220 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 TTC39BQ5VTQ0 682 aaPredicted RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 UNQ6494/PRO21346Q6UXR6 183 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 GPT2Q8TD30 523 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SKA1Q96BD8 255 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SCNM1Q9BWG6 230 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 C6orf106Q9H6K1 298 aaPredicted RBP13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 GAREM1Q9H706 876 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 ASNSD1Q9NWL6 643 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SERGEFQ9UGK8 458 aa13.84□□□□□ -0.19
CTDSP1-212ENST00000494067 SYNJ2BP-COX16A0A087WUM0 186 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 TARSL2A2RTX5 802 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 KCNU1A8MYU2 1149 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 SH3BP5O60239 455 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 HSF2BPO75031 334 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 SIN3BO75182 1162 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 KRT37O76014 449 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 FSBPO95073 299 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 KLK7P49862 253 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 ECT2LQ008S8 904 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 CENPCQ03188 943 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 SULT2A1Q06520 285 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 HNRNPA1L2Q32P51 320 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 OR6B2Q6IFH4 312 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 C11orf57Q6ZUT1 292 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 USP30Q70CQ3 517 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 ADAT2Q7Z6V5 191 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 NAXDQ8IW45 347 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 FAM71AQ8IYT1 594 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 IGSF8Q969P0 613 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 CAMK1GQ96NX5 476 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 OMDQ99983 421 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 TUBGCP2Q9BSJ2 902 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 NAA15Q9BXJ9 866 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 RSPH9Q9H1X1 276 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 IL21RQ9HBE5 538 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 DDIT4Q9NX09 232 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 COX16Q9P0S2 106 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 ERVW-1Q9UQF0 538 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 NEUROG3Q9Y4Z2 214 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 AKAP13Q12802 2813 aa13.83□□□□□ -0.2
CTDSP1-212ENST00000494067 EDDM13A0A1B0GTR0 161 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 LRRC72A6NJI9 287 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 VAV1P15498 845 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 ERCC5P28715 1186 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 CXorf57Q6NSI4 855 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 C14orf80Q86SX3 495 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 ZDHHC17Q8IUH5 632 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 DHX40Q8IX18 779 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 OSGEPQ9NPF4 335 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 TM7SF3Q9NS93 570 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 FBXL12Q9NXK8 326 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 SLCO3A1Q9UIG8 710 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 APOBEC2Q9Y235 224 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-212ENST00000494067 USP24Q9UPU5 2620 aa13.81□□□□□ -0.2
CTDSP1-212ENST00000494067 C1QTNF9BB2RNN3 333 aa13.81□□□□□ -0.2
CTDSP1-212ENST00000494067 EPHB6O15197 1021 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms