RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
MCF2L-231ENST00000494043 RAD54BQ9Y620 910 aa11.73□□□□□ -0.53
MCF2L-231ENST00000494043 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-231ENST00000494043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 A0A1B0GVM2 712 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 TYW5A2RUC4 315 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 TCAF2A6NFQ2 919 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 SLC9A3R1O14745 358 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 TSPAN3O60637 253 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 CLDN11O75508 207 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 MAP3K6O95382 1288 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 KCNA5P22460 613 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 CDH4P55283 916 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 EIF3EP60228 445 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 XRCC4Q13426 336 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 OASLQ15646 514 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 AFMIDQ63HM1 303 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 BZW1Q7L1Q6 419 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 CFAP52Q8N1V2 620 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 UMODL1-AS1Q8N2C9 162 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 TDRD5Q8NAT2 981 aaKnown RBP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 E2F7Q96AV8 911 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 LRRC3BQ96PB8 259 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
MCF2L-231ENST00000494043 NDFIP2Q9NV92 336 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 PCYOX1Q9UHG3 505 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 DNPEPQ9ULA0 475 aa11.72□□□□□ -0.53
MCF2L-231ENST00000494043 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 HEPACAM2A8MVW5 462 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 HACD1B0YJ81 288 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 H7C0C1 242 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TBL1XO60907 577 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 RBP3P10745 1247 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 LAMP2P13473 410 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 MX2P20592 715 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 ATP5OP48047 213 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 KCNJ1P48048 391 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 NDST2P52849 883 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TUBB4BP68371 445 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 DR1Q01658 176 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 GALNT2Q10471 571 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 DHX34Q14147 1143 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 PDK1Q15118 436 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 SKIV2LQ15477 1246 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 MPPE1Q53F39 396 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TEX35Q5T0J7 233 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 MPP7Q5T2T1 576 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 RNF43Q68DV7 783 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TANGO2Q6ICL3 276 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 C8orf74Q6P047 294 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 ARHGAP12Q8IWW6 846 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TP53INP2Q8IXH6 220 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 NETO2Q8NC67 525 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 BPIFB1Q8TDL5 484 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 GRK7Q8WTQ7 553 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 CELF6Q96J87 481 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 NOL6Q9H6R4 1146 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 ZFP14Q9HCL3 533 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 AMACRQ9UHK6 382 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 DRG1Q9Y295 367 aaKnown RBP11.71□□□□□ -0.53
MCF2L-231ENST00000494043 WNT6Q9Y6F9 365 aa11.71□□□□□ -0.53
MCF2L-231ENST00000494043 BRWD1Q9NSI6 2320 aa11.71□□□□□ -0.54
MCF2L-231ENST00000494043 EYSQ5T1H1 3165 aa11.71□□□□□ -0.54
MCF2L-231ENST00000494043 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 NCAM2O15394 837 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 MBTPS2O43462 519 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 RAD51CO43502 376 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 ECEL1O95672 775 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 CYBBP04839 570 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 ITGAVP06756 1048 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 OR1E1P30953 314 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 IFNAR2P48551 515 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 LMNB2Q03252 620 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 PRKD1Q15139 912 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 TPGS1Q6ZTW0 290 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 OTOP3Q7RTS5 596 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 SETD3Q86TU7 594 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC33Q8N5R6 958 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 CCDC26Q8TAB7 109 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 OSCP1Q8WVF1 389 aa11.7□□□□□ -0.54
MCF2L-231ENST00000494043 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
MCF2L-231ENST00000494043 PPM1EQ8WY54 764 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms