RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PBX1P40424 430 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 PTPN9P43378 593 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 ASIC2Q16515 512 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 CXorf57Q6NSI4 855 aaKnown RBP23.33■■□□□ 1.33
SNIP1-203ENST00000493916 PPP1R2P3Q6NXS1 205 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 PHLDB2Q86SQ0 1253 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 C14orf80Q86SX3 495 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 TMPRSS6Q8IU80 811 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 OR2T3Q8NH03 318 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 JOSD2Q8TAC2 188 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 RXFP2Q8WXD0 754 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 MRGPRX3Q96LB0 322 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 HAPLN3Q96S86 360 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 SIK2Q9H0K1 926 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 VPS45Q9NRW7 570 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 CYP8B1Q9UNU6 501 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 TCRBV5S1A1TA0A578 114 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 AP5Z1O43299 807 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SRPRAP08240 638 aaKnown RBP23.32■■□□□ 1.32
SNIP1-203ENST00000493916 PRKCIP41743 596 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 IRAK1P51617 712 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 PLK1P53350 603 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 UBASH3AP57075 661 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 ST8SIA6P61647 398 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 ATP11AP98196 1134 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 CREB5Q02930 508 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 ARID5BQ14865 1188 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 CCDC14Q49A88 953 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SFMBT2Q5VUG0 894 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 ACAD10Q6JQN1 1059 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 CYP2U1Q7Z449 544 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 PRCCQ92733 491 aaPredicted RBP23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SIPA1Q96FS4 1042 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 NUP58Q9BVL2 599 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SELENOOQ9BVL4 669 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SUN2Q9UH99 717 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 ERVW-1Q9UQF0 538 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.32■■□□□ 1.32
SNIP1-203ENST00000493916 DCHS1Q96JQ0 3298 aa23.32■■□□□ 1.32
SNIP1-203ENST00000493916 SPTBN4Q9H254 2564 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 IGLV3-10A0A075B6K4 115 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 SIGLEC16A6NMB1 481 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 GJB6O95452 261 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 IGLV3-19P01714 112 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 TNFAIP3P21580 790 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ID4P47928 161 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 DHPSP49366 369 aaPredicted RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 CDH4P55283 916 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ECT2LQ008S8 904 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 RPL6Q02878 288 aaKnown RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ZNF177Q13360 481 aaPredicted RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 CCDC6Q16204 474 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 E4F1Q66K89 784 aaPredicted RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 STRADAQ7RTN6 431 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 FAM131BQ86XD5 332 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 TMEFF1Q8IYR6 380 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 APCDD1Q8J025 514 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ZNF366Q8N895 744 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 CENPIQ92674 756 aaPredicted RBP23.31■■□□□ 1.32
SNIP1-203ENST00000493916 RMDN1Q96DB5 314 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 PRSS16Q9NQE7 514 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ITM2CQ9NQX7 267 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 TBC1D30Q9Y2I9 924 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 ITIH6Q6UXX5 1313 aa23.31■■□□□ 1.32
SNIP1-203ENST00000493916 A0A1W2PQJ5 194 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 DRGXA6NNA5 263 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 SDHBP21912 280 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 MZF1P28698 734 aaPredicted RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 RFC1P35251 1148 aaPredicted RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 CTSOP43234 321 aaPredicted RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 SULT2A1Q06520 285 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 C15orf59Q2T9L4 293 aaPredicted RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 HNRNPA1L2Q32P51 320 aaKnown RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 ARTNQ5T4W7 220 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 DNAJC24Q6P3W2 148 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 LRRC31Q6UY01 552 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 MCOLN2Q8IZK6 566 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 VCPIP1Q96JH7 1222 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 HAUS4Q9H6D7 363 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 CD93Q9NPY3 652 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 TMPRSS4Q9NRS4 437 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 SNX10Q9Y5X0 201 aa23.3■■□□□ 1.32
SNIP1-203ENST00000493916 TNRC6BQ9UPQ9 1833 aaKnown RBP23.3■■□□□ 1.32
SNIP1-203ENST00000493916 E9PAM4 449 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 GPD1P21695 349 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 LAMA1P25391 3075 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 DPP6P42658 865 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 PTGER3P43115 390 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 TPMTP51580 245 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 SF3A2Q15428 464 aaKnown RBP23.29■■□□□ 1.32
SNIP1-203ENST00000493916 CDO1Q16878 200 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 RSPO4Q2I0M5 234 aaPredicted RBP23.29■■□□□ 1.32
SNIP1-203ENST00000493916 PPP1R15BQ5SWA1 713 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 RNF219Q5W0B1 726 aaPredicted RBP23.29■■□□□ 1.32
SNIP1-203ENST00000493916 LYSMD4Q5XG99 296 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 ZNF571Q7Z3V5 609 aaPredicted RBP23.29■■□□□ 1.32
SNIP1-203ENST00000493916 IQCDQ96DY2 449 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms