RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 DNAAF2Q9NVR5 837 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 FANCLQ9NW38 375 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 STAP1Q9ULZ2 295 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ITIH6Q6UXX5 1313 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SPAG17Q6Q759 2223 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MEI4A8MW99 385 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 RNASEH1O60930 286 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 PAGE1O75459 146 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MBD3O95983 291 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MAOBP27338 520 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 PMLP29590 882 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 NNMTP40261 264 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MAPK8P45983 427 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SHC2P98077 582 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 NME3Q13232 169 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 AUHQ13825 339 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 UAP1L1Q3KQV9 507 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SLC25A52Q3SY17 297 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 TTC31Q49AM3 519 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 C9orf64Q5T6V5 341 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 DCAF12L1Q5VU92 463 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 USP30Q70CQ3 517 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 NOP9Q86U38 636 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 XYLT1Q86Y38 959 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 APCDD1Q8J025 514 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 C1orf216Q8TAB5 229 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 C1orf74Q96LT6 269 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 BTBD1Q9H0C5 482 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SLC32A1Q9H598 525 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 OSGEPQ9NPF4 335 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ARHGEF38Q9NXL2 777 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 LIMA1Q9UHB6 759 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 NCKAP1Q9Y2A7 1128 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MYO18AQ92614 2054 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 SYNJ2BP-COX16A0A087WUM0 186 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 EDDM13A0A1B0GTR0 161 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 OPHN1O60890 802 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 SIN3BO75182 1162 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 CLDN11O75508 207 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 ACSL1P33121 698 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 CTSOP43234 321 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 JAM2P57087 298 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 CDR2Q01850 454 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 MYL5Q02045 173 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF177Q13360 481 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 STX1AQ16623 288 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 RNF219Q5W0B1 726 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 CXorf57Q6NSI4 855 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 SND1Q7KZF4 910 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 PIP4P1Q86T03 277 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 FAM124AQ86V42 546 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 MINDY1Q8N5J2 469 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 IGSF8Q969P0 613 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 ALG14Q96F25 216 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 GTPBP2Q9BX10 602 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 PIGVQ9NUD9 493 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 COX16Q9P0S2 106 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 TMEM59LQ9UK28 342 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 NOCTQ9UK39 431 aaKnown RBP11.85□□□□□ -0.51
LRTM1-202ENST00000493075 TBC1D30Q9Y2I9 924 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 SIK3Q9Y2K2 1263 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 HS3ST4Q9Y661 456 aa11.85□□□□□ -0.51
LRTM1-202ENST00000493075 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 DRGXA6NNA5 263 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 TTC34A8MYJ7 566 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 BCAT2O15382 392 aaPredicted RBP11.84□□□□□ -0.51
LRTM1-202ENST00000493075 GJB3O75712 270 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 ENDOD1O94919 500 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 ADCY5O95622 1261 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 SEMA4FO95754 770 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 CYP1A1P04798 512 aaPredicted RBP11.84□□□□□ -0.51
LRTM1-202ENST00000493075 MMEP08473 750 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 PDGFRAP16234 1089 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF18P17022 549 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 MZF1P28698 734 aaPredicted RBP11.84□□□□□ -0.51
LRTM1-202ENST00000493075 SOX5P35711 763 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 STAT1P42224 750 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 SULT1E1P49888 294 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
LRTM1-202ENST00000493075 CDH4P55283 916 aa11.84□□□□□ -0.51
LRTM1-202ENST00000493075 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms