RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IGHV4-34P06331 123 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 GLI1P08151 1106 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 GOT1P17174 413 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 C5AR1P21730 350 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 NNMTP40261 264 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 CSKP41240 450 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 RGS7P49802 495 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 SGSHP51688 502 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 GALCP54803 685 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 C21orf59P57076 290 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 YWHAZP63104 245 aaKnown RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ECT2LQ008S8 904 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 DMTNQ08495 405 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 EIF4EBP2Q13542 120 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 CDH18Q13634 790 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 SMAD1Q15797 465 aaKnown RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 CST6Q15828 149 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 SLC45A4Q5BKX6 768 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 NADSYN1Q6IA69 706 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 TTI2Q6NXR4 508 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 RFWD3Q6PCD5 774 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 TMPRSS12Q86WS5 348 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 TRIM59Q8IWR1 403 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 PNPLA1Q8N8W4 532 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 OR2T34Q8NGX1 318 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 SNX19Q92543 992 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 BTN2A3PQ96KV6 586 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ORAI3Q9BRQ5 295 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ERVMER34-1Q9H9K5 563 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ASNSD1Q9NWL6 643 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 FBXL12Q9NXK8 326 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 INTS6Q9UL03 887 aaKnown RBP9.45□□□□□ -0.9
HDAC3-212ENST00000492407 ERVW-1Q9UQF0 538 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 PKD1L2Q7Z442 2459 aa9.45□□□□□ -0.9
HDAC3-212ENST00000492407 CEP192Q8TEP8 1941 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 MYH10P35580 1976 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 H0Y8X5 98 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 CAPN9O14815 690 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SLC7A4O43246 635 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 TPD52L2O43399 206 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SIN3BO75182 1162 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 IGLV3-25P01717 112 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 AFPP02771 609 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ATXN1LP0C7T5 689 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SLC8A1P32418 973 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SNX16P57768 344 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 RPS24P62847 133 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 KCNH2Q12809 1159 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 OVGP1Q12889 678 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ELAVL3Q14576 367 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 DCAF6Q58WW2 860 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 PITRM1Q5JRX3 1037 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 RNF219Q5W0B1 726 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ADAT2Q7Z6V5 191 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 CACTIN-AS1Q8N1I8 211 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 CARNMT1Q8N4J0 409 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 OXR1Q8N573 874 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 PDCD7Q8N8D1 485 aaKnown RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ATP6V0D2Q8N8Y2 350 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 WFDC5Q8TCV5 224 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 CLEC4CQ8WTT0 213 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 PRICKLE1Q96MT3 831 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 FAM129BQ96TA1 746 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 ELF4Q99607 663 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-212ENST00000492407 OMDQ99983 421 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 MIS12Q9H081 205 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 THAP9Q9H5L6 903 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 TJP2Q9UDY2 1190 aa9.44□□□□□ -0.9
HDAC3-212ENST00000492407 DSPP15924 2871 aaKnown RBP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 KCNU1A8MYU2 1149 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ALOX15BO15296 676 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 LATO43561 262 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 MAGEC1O60732 1142 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 RNASEH2AO75792 299 aaKnown RBP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 TACR2P21452 398 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 CD38P28907 300 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 RXRGP48443 463 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-212ENST00000492407 ILKQ13418 452 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 MORC3Q14149 939 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 BECN1Q14457 450 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 EFHC1Q5JVL4 640 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 RABGAP1LQ5R372 815 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
HDAC3-212ENST00000492407 DSG4Q86SJ6 1040 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms