RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SCOCQ9UIL1 159 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CNOT7Q9UIV1 285 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TRHDEQ9UKU6 1024 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ASAP1Q9ULH1 1129 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 HPCAL4Q9UM19 191 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SNX12Q9UMY4 172 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHA12Q9UN75 941 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 POLHQ9Y253 713 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ATP8A1Q9Y2Q0 1164 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHA1Q9Y5I3 950 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SLIT3O75094 1523 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NFAT5O94916 1531 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PDS5AQ29RF7 1337 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 BAZ2AQ9UIF9 1905 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 KDM6AO15550 1401 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 BCORQ6W2J9 1755 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ABCC6O95255 1503 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 A0A1W2PS29 197 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SMCO2A6NFE2 343 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 DNAJC9-AS1A6NH13 148 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TSPY2A6NKD2 308 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MARCH11A6NNE9 402 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TMCO5BA8MYB1 307 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 HMGB1P1B2RPK0 211 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 KLRF2D3W0D1 207 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 H3BQF6 201 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC188H7C350 402 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 GCOM1H8Y6P7 765 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 hCG_1984214I3L0E3 225 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 M0QYG6 137 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PES1O00541 588 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PODXLO00592 558 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CHUKO15111 745 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 HTRA2O43464 458 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SRGAP2O75044 1071 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 N4BP1O75113 896 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 GFPT2O94808 682 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SUN1O94901 812 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ZFPL1O95159 310 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ATP1A1P05023 1023 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 IDEP14735 1019 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MALP21145 153 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 IBSPP21815 317 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 GPTP24298 496 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ANXA13P27216 316 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP2C18P33260 490 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CCT6AP40227 531 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MDH1P40925 334 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TECP42680 631 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MMP13P45452 471 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NAP1L1P55209 391 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 EIF3BP55884 814 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ERVK-21P61565 698 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MC2RQ01718 297 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 IFFO1Q0D2I5 559 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SCAPQ12770 1279 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 STK4Q13043 487 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TRAF1Q13077 416 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SNAPC2Q13487 334 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 BIRC3Q13489 604 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CUL1Q13616 776 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NONOQ15233 471 aaKnown RBP eCLIP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PTPRRQ15256 657 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 RPS6KA1Q15418 735 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NPY5RQ15761 445 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C3orf36Q3SXR2 165 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ODF2Q5BJF6 829 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 EARS2Q5JPH6 523 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 RBM20Q5T481 1227 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 AGBL2Q5U5Z8 902 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C12orf60Q5U649 245 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 KLHDC7AQ5VTJ3 777 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SFMBT2Q5VUG0 894 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 KRT79Q5XKE5 535 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NCAPH2Q6IBW4 605 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MIS18BP1Q6P0N0 1132 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C6orf89Q6UWU4 347 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM108Q6UXF1 575 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SERPINA13PQ6UXR4 307 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MMS22LQ6ZRQ5 1243 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PIK3AP1Q6ZUJ8 805 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TMTC3Q6ZXV5 915 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 UNC13DQ70J99 1090 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF365Q70YC5 407 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PTF1AQ7RTS3 328 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ARMC9Q7Z3E5 817 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CACNA2D4Q7Z3S7 1137 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 USP37Q86T82 979 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TADA2BQ86TJ2 420 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 RAB11FIP4Q86YS3 637 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C2CD5Q86YS7 1000 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 FMNL3Q8IVF7 1028 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 GRAMD1CQ8IYS0 662 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MREGQ8N565 214 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF713Q8N859 430 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NOA1Q8NC60 698 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PSD4Q8NDX1 1056 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ACRBPQ8NEB7 543 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM46DQ8NEK8 389 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NEK11Q8NG66 645 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms