RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MAIP1Q8WWC4 291 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
MCF2L-230ENST00000491028 ZFYVE19Q96K21 471 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 NAP1L3Q99457 506 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-230ENST00000491028 RPP25Q9BUL9 199 aaKnown RBP19.17■□□□□ 0.66
MCF2L-230ENST00000491028 TUBB2BQ9BVA1 445 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 BBS2Q9BXC9 721 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 KCNK12Q9HB15 430 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 RNF14Q9UBS8 474 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 COL4A3Q01955 1670 aa19.17■□□□□ 0.66
MCF2L-230ENST00000491028 COL6A3P12111 3177 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 XIRP2A4UGR9 3374 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 PGRMC1O00264 195 aaKnown RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 CST8O60676 142 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 CNTN5O94779 1100 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 LUC7L3O95232 432 aaKnown RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 ADH5P11766 374 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 TGM2P21980 687 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 HOXD9P28356 352 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 NR1H3Q13133 447 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 RUNX3Q13761 415 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 PAFAH1B3Q15102 231 aaKnown RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 NCBP2-AS2Q69YL0 99 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 RHBDF2Q6PJF5 856 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 CIR1Q86X95 450 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 CCDC117Q8IWD4 279 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-230ENST00000491028 PLD5Q8N7P1 536 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 HEMGNQ9BXL5 484 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 EBF3Q9H4W6 596 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 BRD9Q9H8M2 597 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 HPS4Q9NQG7 708 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 ZNF212Q9UDV6 495 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 LIMD1Q9UGP4 676 aa19.16■□□□□ 0.66
MCF2L-230ENST00000491028 COL4A2P08572 1712 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-230ENST00000491028 NEDD8-MDP1E9PL57 170 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ARNTLO00327 626 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 URI1O94763 535 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-230ENST00000491028 FGGP02679 453 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ARSAP15289 507 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ZP2Q05996 745 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 KLF1Q13351 362 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ZNF177Q13360 481 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ANO4Q32M45 955 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 TFAP2DQ7Z6R9 452 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 SETD3Q86TU7 594 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-230ENST00000491028 TTC13Q8NBP0 860 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 RSAD2Q8WXG1 361 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 HERPUD2Q9BSE4 406 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ECT2Q9H8V3 914 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 ETNK2Q9NVF9 386 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 C5orf42Q9H799 3197 aa19.15■□□□□ 0.66
MCF2L-230ENST00000491028 H0Y626 953 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 APOC4-APOC2K7ER74 178 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 ZNF185O15231 689 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 APOC2P02655 101 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 TYRP14679 529 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 OR1E1P30953 314 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 NDST2P52849 883 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 OXCT1P55809 520 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 DYNLT1P63172 113 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 CDH18Q13634 790 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 LLGL1Q15334 1064 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 LONRF2Q1L5Z9 754 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 DNTTIP2Q5QJE6 756 aaKnown RBP19.14■□□□□ 0.65
MCF2L-230ENST00000491028 CCDC181Q5TID7 509 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 ZNF783Q6ZMS7 281 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 CREG2Q8IUH2 290 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 MFN1Q8IWA4 741 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 UMODL1-AS1Q8N2C9 162 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 SLC44A3Q8N4M1 653 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 XPO6Q96QU8 1125 aaKnown RBP19.14■□□□□ 0.65
MCF2L-230ENST00000491028 SLC2A11Q9BYW1 496 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 TRPV5Q9NQA5 729 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 CDC23Q9UJX2 597 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 TBC1D30Q9Y2I9 924 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 RAD54BQ9Y620 910 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 KIAA1549LQ6ZVL6 1849 aa19.14■□□□□ 0.65
MCF2L-230ENST00000491028 TICRRQ7Z2Z1 1910 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 CACNG3O60359 315 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 RHOCP08134 193 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 ETFBP38117 255 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 PAFAH1B1P43034 410 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 NR2C2P49116 596 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 YBEYP58557 167 aaPredicted RBP19.13■□□□□ 0.65
MCF2L-230ENST00000491028 TNK2Q07912 1038 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 ADCY2Q08462 1091 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 ITPRIPL2Q3MIP1 535 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 BZW1Q7L1Q6 419 aaKnown RBP19.13■□□□□ 0.65
MCF2L-230ENST00000491028 CARNMT1Q8N4J0 409 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 FIBINQ8TAL6 211 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 CSGALNACT1Q8TDX6 532 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 P3H4Q92791 437 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 DNASE1L2Q92874 299 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 BHMTQ93088 406 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 P2RY11Q96G91 374 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 MS4A14Q96JA4 679 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 KLC2Q9H0B6 622 aa19.13■□□□□ 0.65
MCF2L-230ENST00000491028 PLK2Q9NYY3 685 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms