RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PITRM1Q5JRX3 1037 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 KIAA1211LQ6NV74 962 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 CIR1Q86X95 450 aaPredicted RBP17.88■□□□□ 0.45
MDC1-206ENST00000489540 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 CYB5D2Q8WUJ1 264 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 TRIM5Q9C035 493 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
MDC1-206ENST00000489540 TMPRSS4Q9NRS4 437 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 INTS6Q9UL03 887 aaKnown RBP17.88■□□□□ 0.45
MDC1-206ENST00000489540 TBC1D30Q9Y2I9 924 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 SCINQ9Y6U3 715 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 KIAA1549LQ6ZVL6 1849 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 IGLV3-10A0A075B6K4 115 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 SRGAP2O75044 1071 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 GABRG2P18507 467 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 CSKP41240 450 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 ST8SIA6P61647 398 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 NRG1Q02297 640 aaPredicted RBP17.87■□□□□ 0.45
MDC1-206ENST00000489540 SULT2A1Q06520 285 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 PTPRNQ16849 979 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 PLEKHG6Q3KR16 790 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 LAIR1Q6GTX8 287 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 KDM1BQ8NB78 822 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 RUBCNQ92622 972 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 NTAN1Q96AB6 310 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 ZNF653Q96CK0 615 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 DNAJC7Q99615 494 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 TPSD1Q9BZJ3 242 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 TMEM245Q9H330 911 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 PPARGC1AQ9UBK2 798 aaKnown RBP17.87■□□□□ 0.45
MDC1-206ENST00000489540 SUN2Q9UH99 717 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 SNX10Q9Y5X0 201 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 RAD54BQ9Y620 910 aa17.87■□□□□ 0.45
MDC1-206ENST00000489540 TMEM191CA6NGB0 347 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 CCP110O43303 1012 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 EPHX1P07099 455 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 SRPRAP08240 638 aaKnown RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 PLEKP08567 350 aaPredicted RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 ECT2LQ008S8 904 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 RAB6CQ53S08 254 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 CXorf57Q6NSI4 855 aaKnown RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 ALKBH5Q6P6C2 394 aaKnown RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 TMC6Q7Z403 805 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 SLFN11Q7Z7L1 901 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 SETD3Q86TU7 594 aaPredicted RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 DNAAF5Q86Y56 855 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 APCDD1Q8J025 514 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 FNIP1Q8TF40 1166 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 ZC3H10Q96K80 434 aaKnown RBP17.86■□□□□ 0.45
MDC1-206ENST00000489540 RAB6CQ9H0N0 254 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 RBSNQ9H1K0 784 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 RETREG1Q9H6L5 497 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 ARHGAP20Q9P2F6 1191 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 OR12D3Q9UGF7 316 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 GMEB2Q9UKD1 530 aa17.86■□□□□ 0.45
MDC1-206ENST00000489540 A0A087X0T9 212 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ZNF217O75362 1048 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 CNTN5O94779 1100 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 RHOBTB1O94844 696 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 FAM228BP0C875 321 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 PRKCHP24723 683 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 PSMA2P25787 234 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 P2RY2P41231 377 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 IRAK1P51617 712 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 AIF1P55008 147 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 SCAPQ12770 1279 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ALFQ53S48 1182 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 RNF219Q5W0B1 726 aaPredicted RBP17.85■□□□□ 0.45
MDC1-206ENST00000489540 SCYL2Q6P3W7 929 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 LOXL4Q96JB6 756 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 SPACA7Q96KW9 195 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 MRGPRX1Q96LB2 322 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 NCAPGQ9BPX3 1015 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 FEM1AQ9BSK4 669 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ZYG11BQ9C0D3 744 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 NCDNQ9UBB6 729 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ERVW-1Q9UQF0 538 aa17.85■□□□□ 0.45
MDC1-206ENST00000489540 ZFHX2Q9C0A1 2572 aaPredicted RBP17.85■□□□□ 0.45
MDC1-206ENST00000489540 ATMINO43313 823 aaPredicted RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 RETP07949 1114 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 NDUFV2P19404 249 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 MZF1P28698 734 aaPredicted RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 EIF4A3P38919 411 aaKnown RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 NNMTP40261 264 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 OGDHQ02218 1023 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 CAMK2GQ13555 558 aaPredicted RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 ELF2Q15723 593 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 LPAL2Q16609 132 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 CCDC122Q5T0U0 273 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 C6orf118Q5T5N4 469 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 METTL3Q86U44 580 aaKnown RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 KBTBD6Q86V97 674 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 CNGA4Q8IV77 575 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 FAM160A2Q8N612 972 aaPredicted RBP17.84■□□□□ 0.45
MDC1-206ENST00000489540 CCDC185Q8N715 623 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 HINFPQ9BQA5 517 aa17.84■□□□□ 0.45
MDC1-206ENST00000489540 FBRSQ9HAH7 460 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms