RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ST8SIA6P61647 398 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 NOMO3P69849 1222 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 AUHQ13825 339 aaKnown RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 PLEKHG6Q3KR16 790 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 DCAF12L1Q5VU92 463 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 TRNP1Q6NT89 227 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SLC23A3Q6PIS1 610 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 METTL3Q86U44 580 aaKnown RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 ZCCHC9Q8N567 271 aaKnown RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 AOPEPQ8N6M6 819 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 ZNF397Q8NF99 534 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SNX19Q92543 992 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 TBCBQ99426 244 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 NPY6RQ99463 290 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 HSD3B7Q9H2F3 369 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 C6orf106Q9H6K1 298 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SLCO3A1Q9UIG8 710 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 KCNK5O95279 499 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 GJB6O95452 261 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 LSM8O95777 96 aaKnown RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 MBD3O95983 291 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 ADRB1P08588 477 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SERPINF2P08697 491 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 ATP1A3P13637 1013 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 VAV1P15498 845 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 CHRNB2P17787 502 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 ACSL1P33121 698 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SOX5P35711 763 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 FLT3P36888 993 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 GABRB2P47870 512 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 FMO1Q01740 532 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 UBXN1Q04323 297 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 GFPT1Q06210 699 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 TYRO3Q06418 890 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 NCAPHQ15003 741 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 RAB6CQ53S08 254 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 RABGAP1LQ5R372 815 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SYCP2LQ5T4T6 812 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 N4BP2L1Q5TBK1 243 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SH3PXD2AQ5TCZ1 1133 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 DAB2IPQ5VWQ8 1189 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 CXorf57Q6NSI4 855 aaKnown RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 ZDHHC17Q8IUH5 632 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 ZNF557Q8N988 423 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 OR52K2Q8NGK3 314 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SLC30A5Q8TAD4 765 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 CFAP57Q96MR6 1250 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 NUP58Q9BVL2 599 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 TKTL2Q9H0I9 626 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 RAB6CQ9H0N0 254 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 CAPN10Q9HC96 672 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 METTL5Q9NRN9 209 aaKnown RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 LIMA1Q9UHB6 759 aaKnown RBP14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SLC6A14Q9UN76 642 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 SLCO1B1Q9Y6L6 691 aa14.46□□□□□ -0.09
VTI1A-206ENST00000489142 TP53BP1Q12888 1972 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 A0A1B0GVM2 712 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 TCAF2A6NFQ2 919 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 PLXNA2O75051 1894 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 CNTN5O94779 1100 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 MOCS3O95396 460 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 IGLV3-19P01714 112 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 DNTTP04053 509 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ASLP04424 464 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF18P17022 549 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 CDK11BP21127 795 aaKnown RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 OXTRP30559 389 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 HOXD12P35452 270 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 DPP6P42658 865 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 CXCR3P49682 368 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ATXN3P54252 364 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ECT2LQ008S8 904 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 DEUP1Q05D60 604 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 HNRNPA1L2Q32P51 320 aaKnown RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ANO6Q4KMQ2 910 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 WDR45BQ5MNZ6 344 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 C9orf64Q5T6V5 341 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 RNF219Q5W0B1 726 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF776Q68DI1 518 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 MMAAQ8IVH4 418 aaKnown RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 EMC1Q8N766 993 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 DEFB124Q8NES8 71 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 CEP76Q8TAP6 659 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 GANCQ8TET4 914 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 TMEM131Q92545 1883 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 FOXJ1Q92949 421 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 WDCPQ9H6R7 721 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 SERGEFQ9UGK8 458 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 SUN2Q9UH99 717 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 EIF2B4Q9UI10 523 aaKnown RBP14.45□□□□□ -0.1
VTI1A-206ENST00000489142 STAP1Q9ULZ2 295 aa14.45□□□□□ -0.1
VTI1A-206ENST00000489142 DOCK4Q8N1I0 1966 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 MID1O15344 667 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 PSMD8P48556 350 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 CDR2Q01850 454 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 ALFQ53S48 1182 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms