RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 STXBP5Q5T5C0 1151 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ADGRF1Q5T601 910 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 TTC39BQ5VTQ0 682 aaPredicted RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 RFWD3Q6PCD5 774 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 GRASPQ7Z6J2 395 aaPredicted RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 PCGF5Q86SE9 256 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 PRUNE1Q86TP1 453 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 NLRP14Q86W24 1093 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 CIR1Q86X95 450 aaPredicted RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 ZNF354CQ86Y25 554 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 GLIS1Q8NBF1 620 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 NETO2Q8NC67 525 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 CAVIN3Q969G5 261 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ZNF707Q96C28 371 aaPredicted RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 HDAC11Q96DB2 347 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 TCEAL4Q96EI5 215 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ZFRQ96KR1 1074 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ZDHHC18Q9NUE0 388 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 TMEM248Q9NWD8 314 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 AGO1Q9UL18 857 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 SHOC2Q9UQ13 582 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ZNF510Q9Y2H8 683 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 PLXNA4Q9HCM2 1894 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 A0A0A0MRY4 1105 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 ARHGAP42A6NI28 874 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 DRGXA6NNA5 263 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 RFXAPO00287 272 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 DNALI1O14645 258 aaPredicted RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 OPHN1O60890 802 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 RAMP2O60895 175 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CLDN11O75508 207 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 NEBLO76041 1014 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CNTN5O94779 1100 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 KLKB1P03952 638 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 VAV1P15498 845 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 ECHS1P30084 290 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 SLC6A4P31645 630 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CCR2P41597 374 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 IRAK1P51617 712 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 NDST2P52849 883 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 NTHL1P78549 312 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 PPIDQ08752 370 aaKnown RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 MORF4L2Q15014 288 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 ALFQ53S48 1182 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 ZDHHC24Q6UX98 284 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 TMC5Q6UXY8 1006 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CEP128Q6ZU80 1094 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 HDXQ7Z353 690 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CCDC25Q86WR0 208 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 LRRC49Q8IUZ0 686 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 PPIL6Q8IXY8 311 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CCDC13Q8IYE1 715 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 UMODL1-AS1Q8N2C9 162 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 TAB3Q8N5C8 712 aaPredicted RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 HJURPQ8NCD3 748 aaPredicted RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 CCDC110Q8TBZ0 833 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 FBXO25Q8TCJ0 367 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 ART4Q93070 314 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 IGSF8Q969P0 613 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 P2RY11Q96G91 374 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 GDAP1L1Q96MZ0 367 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 SLC46A2Q9BY10 475 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 KLC2Q9H0B6 622 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 TSPYL1Q9H0U9 437 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 NEUROG2Q9H2A3 272 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 NSUN3Q9H649 340 aaKnown RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 RETREG1Q9H6L5 497 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 RAB6BQ9NRW1 208 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 KLHL8Q9P2G9 620 aaPredicted RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
USP11-211ENST00000489111 ARHGAP26Q9UNA1 814 aa10.28□□□□□ -0.76
USP11-211ENST00000489111 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 A0A1B0GVM2 712 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 TCAF2A6NFQ2 919 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 C5orf60A6NFR6 353 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 RASA4BC9J798 803 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 E7EVH7 732 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 KCNK1O00180 336 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 SMAPO00193 183 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 LEFTY2O00292 366 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 SCAMP3O14828 347 aaKnown RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 RASA4O43374 803 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 TSPAN3O60637 253 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 GCATO75600 419 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 FAM153BP0C7A2 387 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 CEBPBP17676 345 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 IVDP26440 423 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 OR1E1P30953 314 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 CDH4P55283 916 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 RBM10P98175 930 aaKnown RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 ZNF33AQ06730 810 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms