RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PLEKHG6Q3KR16 790 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 TRIM61Q5EBN2 209 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 RABGAP1LQ5R372 815 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 C14orf80Q86SX3 495 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 DHX40Q8IX18 779 aaKnown RBP25.8■■□□□ 1.72
HMGN1-217ENST00000489072 PGAP3Q96FM1 320 aaPredicted RBP25.8■■□□□ 1.72
HMGN1-217ENST00000489072 ZNF419Q96HQ0 510 aaPredicted RBP25.8■■□□□ 1.72
HMGN1-217ENST00000489072 BPIFA3Q9BQP9 254 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 TMEM59LQ9UK28 342 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 STAP1Q9ULZ2 295 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 CACNA1EQ15878 2313 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 IGLV3-19P01714 112 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 SLC25A52Q3SY17 297 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 TTC39BQ5VTQ0 682 aaPredicted RBP25.79■■□□□ 1.72
HMGN1-217ENST00000489072 IL31Q6EBC2 164 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 MSANTD4Q8NCY6 345 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 RPRD1AQ96P16 312 aaPredicted RBP25.79■■□□□ 1.72
HMGN1-217ENST00000489072 PCDHB18PQ96TA0 734 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 NAT10Q9H0A0 1025 aaKnown RBP25.79■■□□□ 1.72
HMGN1-217ENST00000489072 ARHGEF38Q9NXL2 777 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 VANGL2Q9ULK5 521 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 ERVW-1Q9UQF0 538 aa25.79■■□□□ 1.72
HMGN1-217ENST00000489072 ASCC3Q8N3C0 2202 aaKnown RBP25.79■■□□□ 1.72
HMGN1-217ENST00000489072 NYNRINQ9P2P1 1898 aaKnown RBP25.79■■□□□ 1.72
HMGN1-217ENST00000489072 A0A1B0GVM2 712 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 TCAF2A6NFQ2 919 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 ACADMP11310 421 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 MMP8P22894 467 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 HOXD12P35452 270 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 DPP6P42658 865 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 NUMBP49757 651 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 DEUP1Q05D60 604 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 BRMS1LQ5PSV4 323 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 CXorf57Q6NSI4 855 aaKnown RBP25.78■■□□□ 1.72
HMGN1-217ENST00000489072 SLC30A5Q8TAD4 765 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 TKTL2Q9H0I9 626 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 SIK2Q9H0K1 926 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 SUN2Q9UH99 717 aa25.78■■□□□ 1.72
HMGN1-217ENST00000489072 PCDH15Q96QU1 1955 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 C4orf47A7E2U8 309 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 CDX4O14627 284 aaPredicted RBP25.77■■□□□ 1.72
HMGN1-217ENST00000489072 TEX33O43247 280 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 MOCS3O95396 460 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 PDGFRAP16234 1089 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 MZF1P28698 734 aaPredicted RBP25.77■■□□□ 1.72
HMGN1-217ENST00000489072 ST8SIA6P61647 398 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 RPS14P62263 151 aaKnown RBP25.77■■□□□ 1.72
HMGN1-217ENST00000489072 MTA1Q13330 715 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 SLC23A3Q6PIS1 610 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 BNIPLQ7Z465 357 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 OR52K2Q8NGK3 314 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 GPR174Q9BXC1 333 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 WDCPQ9H6R7 721 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 FBRSQ9HAH7 460 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 METTL5Q9NRN9 209 aaKnown RBP25.77■■□□□ 1.72
HMGN1-217ENST00000489072 TMPRSS4Q9NRS4 437 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 SNX10Q9Y5X0 201 aa25.77■■□□□ 1.72
HMGN1-217ENST00000489072 TTC34A8MYJ7 566 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 SRPRAP08240 638 aaKnown RBP25.76■■□□□ 1.71
HMGN1-217ENST00000489072 OXTRP30559 389 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 ECT2LQ008S8 904 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 HNRNPA1L2Q32P51 320 aaKnown RBP25.76■■□□□ 1.71
HMGN1-217ENST00000489072 C5orf22Q49AR2 442 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 PPM1JQ5JR12 505 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 TRIM72Q6ZMU5 477 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 PHLDB2Q86SQ0 1253 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 FAM124AQ86V42 546 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 KDM1BQ8NB78 822 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 CFAP57Q96MR6 1250 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 C11orf70Q9BRQ4 267 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 FUCA2Q9BTY2 467 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 NUSAP1Q9BXS6 441 aaKnown RBP25.76■■□□□ 1.71
HMGN1-217ENST00000489072 FSCN3Q9NQT6 498 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 SLCO3A1Q9UIG8 710 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 DOCK4Q8N1I0 1966 aa25.76■■□□□ 1.71
HMGN1-217ENST00000489072 SIN3BO75182 1162 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 F9P00740 461 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 CFIP05156 583 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 UNGP13051 313 aaPredicted RBP25.75■■□□□ 1.71
HMGN1-217ENST00000489072 STK19P49842 368 aaPredicted RBP25.75■■□□□ 1.71
HMGN1-217ENST00000489072 PLK1P53350 603 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 PTP4A2Q12974 167 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 SLC12A1Q13621 1099 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 ARID5BQ14865 1188 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 DUOXA1Q1HG43 343 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 SND1Q7KZF4 910 aaKnown RBP eCLIP25.75■■□□□ 1.71
HMGN1-217ENST00000489072 ARCQ7LC44 396 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 ZNF683Q8IZ20 524 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 EMC1Q8N766 993 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 FOXJ1Q92949 421 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 ALG14Q96F25 216 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 RPL10LQ96L21 214 aaKnown RBP25.75■■□□□ 1.71
HMGN1-217ENST00000489072 NUP58Q9BVL2 599 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 TMEM9BQ9NQ34 198 aa25.75■■□□□ 1.71
HMGN1-217ENST00000489072 ITIH6Q6UXX5 1313 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 CNTN5O94779 1100 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 MAOBP27338 520 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 ARTNQ5T4W7 220 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 CEP76Q8TAP6 659 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 RSPH9Q9H1X1 276 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms